Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 AC107890.1-201ENST00000422478 521 ntBASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 AC022494.1-201ENST00000466044 728 ntBASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 AC026434.2-201ENST00000506094 1078 ntBASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHAMP1Q96JM3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 MEIS3P1-201ENST00000495167 958 ntBASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 TIMM17BP1-201ENST00000545713 516 ntBASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 AC005225.4-201ENST00000557330 545 ntBASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 AC004466.1-201ENST00000599515 1080 ntBASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 AL359881.2-201ENST00000602973 570 ntBASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 SRD5A3P1-201ENST00000603021 949 ntBASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHAMP1Q96JM3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 AC023794.5-201ENST00000564380 2157 ntBASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 RN7SL832P-201ENST00000607781 1756 ntBASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 AL365181.3-201ENST00000605886 3222 ntBASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
CHAMP1Q96JM3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHAMP1Q96JM3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms