Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 PDIA3P1-201ENST00000471856 1510 ntBASIC13.13□□□□□ -0.31
TMEM54Q969K7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM54Q969K7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM54Q969K7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 MYO15B-237ENST00000642007 4893 ntBASIC13.12□□□□□ -0.31
TMEM54Q969K7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 AC097359.2-201ENST00000604992 2389 ntBASIC13.12□□□□□ -0.31
TMEM54Q969K7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 MIR1202-201ENST00000408529 83 ntBASIC13.12□□□□□ -0.31
TMEM54Q969K7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 AC005034.1-201ENST00000426657 489 ntBASIC13.12□□□□□ -0.31
TMEM54Q969K7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 PUDPP3-201ENST00000445368 636 ntBASIC13.12□□□□□ -0.31
TMEM54Q969K7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 AC073413.1-201ENST00000603927 732 ntBASIC13.12□□□□□ -0.31
TMEM54Q969K7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.12□□□□□ -0.31
TMEM54Q969K7 AC002472.3-201ENST00000640124 621 ntBASIC13.12□□□□□ -0.31
TMEM54Q969K7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 AC015688.4-201ENST00000580780 1647 ntBASIC13.12□□□□□ -0.31
TMEM54Q969K7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TMEM54Q969K7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 MYADML-201ENST00000474610 2147 ntBASIC13.12□□□□□ -0.31
TMEM54Q969K7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM54Q969K7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 AL009178.2-201ENST00000597278 2719 ntBASIC13.11□□□□□ -0.31
TMEM54Q969K7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 AC079776.1-201ENST00000401540 1152 ntBASIC13.11□□□□□ -0.31
TMEM54Q969K7 AL136309.1-201ENST00000403917 691 ntBASIC13.11□□□□□ -0.31
TMEM54Q969K7 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 AC112492.5-201ENST00000421897 457 ntBASIC13.11□□□□□ -0.31
TMEM54Q969K7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 U91328.1-201ENST00000437528 223 ntBASIC13.11□□□□□ -0.31
TMEM54Q969K7 AC234783.1-201ENST00000441761 496 ntBASIC13.11□□□□□ -0.31
TMEM54Q969K7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms