Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF25Q93038 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF25Q93038 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.83■□□□□ 0.28
TNFRSF25Q93038 AL136379.1-201ENST00000623471 2642 ntBASIC16.83■□□□□ 0.28
TNFRSF25Q93038 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.82■□□□□ 0.28
TNFRSF25Q93038 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 OR8S1-201ENST00000310194 1080 ntBASIC16.82■□□□□ 0.28
TNFRSF25Q93038 MIR658-201ENST00000385210 100 ntBASIC16.82■□□□□ 0.28
TNFRSF25Q93038 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 KRT223P-202ENST00000449164 1292 ntBASIC16.82■□□□□ 0.28
TNFRSF25Q93038 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 AC132192.2-201ENST00000596206 1147 ntBASIC16.82■□□□□ 0.28
TNFRSF25Q93038 AC027601.3-201ENST00000622907 509 ntBASIC16.82■□□□□ 0.28
TNFRSF25Q93038 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF25Q93038 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 BNIP3P42-201ENST00000454982 569 ntBASIC16.81■□□□□ 0.28
TNFRSF25Q93038 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 MIR4741-201ENST00000579822 90 ntBASIC16.81■□□□□ 0.28
TNFRSF25Q93038 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 BNIP3P29-201ENST00000598302 571 ntBASIC16.81■□□□□ 0.28
TNFRSF25Q93038 AC239800.4-201ENST00000603712 296 ntBASIC16.81■□□□□ 0.28
TNFRSF25Q93038 AC017083.2-201ENST00000608069 979 ntBASIC16.81■□□□□ 0.28
TNFRSF25Q93038 MIR6805-201ENST00000615055 62 ntBASIC16.81■□□□□ 0.28
TNFRSF25Q93038 AC011447.5-201ENST00000616168 564 ntBASIC16.81■□□□□ 0.28
TNFRSF25Q93038 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TNFRSF25Q93038 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms