Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.88■□□□□ 0.13
SHC3Q92529 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SHC3Q92529 KRT90P-201ENST00000549264 1064 ntBASIC15.88■□□□□ 0.13
SHC3Q92529 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.88■□□□□ 0.13
SHC3Q92529 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.88■□□□□ 0.13
SHC3Q92529 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.88■□□□□ 0.13
SHC3Q92529 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHC3Q92529 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SHC3Q92529 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SHC3Q92529 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SHC3Q92529 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.87■□□□□ 0.13
SHC3Q92529 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SHC3Q92529 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.87■□□□□ 0.13
SHC3Q92529 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 AC063926.3-201ENST00000624734 5658 ntBASIC15.87■□□□□ 0.13
SHC3Q92529 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.87■□□□□ 0.13
SHC3Q92529 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.87■□□□□ 0.13
SHC3Q92529 AC004945.1-201ENST00000416738 983 ntBASIC15.87■□□□□ 0.13
SHC3Q92529 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.87■□□□□ 0.13
SHC3Q92529 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.87■□□□□ 0.13
SHC3Q92529 AC078819.1-201ENST00000547454 765 ntBASIC15.87■□□□□ 0.13
SHC3Q92529 AC012085.1-201ENST00000548270 765 ntBASIC15.87■□□□□ 0.13
SHC3Q92529 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.87■□□□□ 0.13
SHC3Q92529 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.87■□□□□ 0.13
SHC3Q92529 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 AC006453.4-201ENST00000636949 1252 ntBASIC15.87■□□□□ 0.13
SHC3Q92529 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SHC3Q92529 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SHC3Q92529 GRK6P1-201ENST00000400595 1711 ntBASIC15.87■□□□□ 0.13
SHC3Q92529 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SHC3Q92529 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 KHSRPP1-201ENST00000427983 1768 ntBASIC15.87■□□□□ 0.13
SHC3Q92529 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.87■□□□□ 0.13
SHC3Q92529 AC215219.1-201ENST00000400706 1817 ntBASIC15.87■□□□□ 0.13
SHC3Q92529 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHC3Q92529 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SHC3Q92529 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.86■□□□□ 0.13
SHC3Q92529 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.86■□□□□ 0.13
SHC3Q92529 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SHC3Q92529 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.86■□□□□ 0.13
SHC3Q92529 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.86■□□□□ 0.13
SHC3Q92529 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.86■□□□□ 0.13
SHC3Q92529 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SHC3Q92529 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.86■□□□□ 0.13
SHC3Q92529 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SHC3Q92529 ARSEP1-201ENST00000420443 635 ntBASIC15.86■□□□□ 0.13
SHC3Q92529 FAM8A4P-201ENST00000435433 1213 ntBASIC15.86■□□□□ 0.13
SHC3Q92529 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.86■□□□□ 0.13
SHC3Q92529 PUDPP3-201ENST00000445368 636 ntBASIC15.86■□□□□ 0.13
SHC3Q92529 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.86■□□□□ 0.13
SHC3Q92529 AC007551.1-201ENST00000457394 519 ntBASIC15.86■□□□□ 0.13
SHC3Q92529 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.86■□□□□ 0.13
SHC3Q92529 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHC3Q92529 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.86■□□□□ 0.13
SHC3Q92529 OR10B1P-201ENST00000601666 907 ntBASIC15.86■□□□□ 0.13
SHC3Q92529 MIR6074-201ENST00000612054 107 ntBASIC15.86■□□□□ 0.13
SHC3Q92529 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms