Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 AL355334.1-201ENST00000417713 215 ntBASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 EEF1DP6-201ENST00000449232 372 ntBASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 AC026740.1-201ENST00000607068 791 ntBASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 AC007663.3-201ENST00000609632 465 ntBASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 AP001002.3-201ENST00000623482 206 ntBASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NKX2-3Q8TAU0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 AL390755.1-201ENST00000623716 2027 ntBASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 AC079178.1-201ENST00000420915 656 ntBASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 AC114501.1-201ENST00000445949 172 ntBASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 KLF2P1-201ENST00000447438 1042 ntBASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 SPTLC1P5-201ENST00000450718 252 ntBASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 FGFR3P5-201ENST00000564496 886 ntBASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 AC005730.2-201ENST00000564549 1184 ntBASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 AC023908.3-201ENST00000564211 3047 ntBASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 E2F3P2-201ENST00000447755 1422 ntBASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX2-3Q8TAU0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-3Q8TAU0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-3Q8TAU0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-3Q8TAU0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
NKX2-3Q8TAU0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NKX2-3Q8TAU0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NKX2-3Q8TAU0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-3Q8TAU0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-3Q8TAU0 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-3Q8TAU0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX2-3Q8TAU0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX2-3Q8TAU0 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NKX2-3Q8TAU0 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms