Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST2Q8NFU1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 POM121L10P-201ENST00000436994 1285 ntBASIC16.03■□□□□ 0.16
BEST2Q8NFU1 KRT8P13-201ENST00000463294 1010 ntBASIC16.03■□□□□ 0.16
BEST2Q8NFU1 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 MIR3615-201ENST00000581999 87 ntBASIC16.03■□□□□ 0.16
BEST2Q8NFU1 AC103810.3-201ENST00000583567 96 ntBASIC16.03■□□□□ 0.16
BEST2Q8NFU1 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 AL118558.3-201ENST00000607414 1079 ntBASIC16.03■□□□□ 0.16
BEST2Q8NFU1 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 AC007292.2-201ENST00000593524 1812 ntBASIC16.03■□□□□ 0.16
BEST2Q8NFU1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 CICP23-201ENST00000605013 2741 ntBASIC16.03■□□□□ 0.16
BEST2Q8NFU1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST2Q8NFU1 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 AC068418.2-201ENST00000577309 3703 ntBASIC16.02■□□□□ 0.16
BEST2Q8NFU1 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 AC010141.1-201ENST00000411585 623 ntBASIC16.02■□□□□ 0.16
BEST2Q8NFU1 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.02■□□□□ 0.16
BEST2Q8NFU1 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 AC243960.2-201ENST00000600996 747 ntBASIC16.02■□□□□ 0.16
BEST2Q8NFU1 AL022328.3-201ENST00000607943 679 ntBASIC16.02■□□□□ 0.16
BEST2Q8NFU1 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.02■□□□□ 0.16
BEST2Q8NFU1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BEST2Q8NFU1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.02■□□□□ 0.15
BEST2Q8NFU1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
BEST2Q8NFU1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.02■□□□□ 0.15
BEST2Q8NFU1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.02■□□□□ 0.15
BEST2Q8NFU1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.02■□□□□ 0.15
BEST2Q8NFU1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BEST2Q8NFU1 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.02■□□□□ 0.15
BEST2Q8NFU1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
BEST2Q8NFU1 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BEST2Q8NFU1 AC006058.4-201ENST00000624016 1670 ntBASIC16.02■□□□□ 0.15
BEST2Q8NFU1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
BEST2Q8NFU1 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms