Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 AP006294.1-201ENST00000415407 339 ntBASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 AC026434.2-201ENST00000506094 1078 ntBASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 MTHFR-210ENST00000641407 2387 ntBASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 AL359183.1-201ENST00000623796 2132 ntBASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 GRK6P1-201ENST00000400595 1711 ntBASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
TTC9CQ8N5M4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 LINC00552-201ENST00000625151 2579 ntBASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms