Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEFF1Q8IYR6 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 AC103810.10-201ENST00000606504 343 ntBASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 AC051619.9-201ENST00000623237 597 ntBASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 HLA-C-210ENST00000640219 976 ntBASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 AC020658.6-201ENST00000623564 1870 ntBASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEFF1Q8IYR6 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 CAP2P1-201ENST00000557743 1390 ntBASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 SSR4P1-203ENST00000599569 2260 ntBASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 RPSAP31-201ENST00000416648 895 ntBASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 RPL8P2-201ENST00000430538 502 ntBASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 AC078875.1-201ENST00000431907 724 ntBASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 AC114501.1-201ENST00000445949 172 ntBASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 AC008723.1-201ENST00000506922 207 ntBASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 AC026803.1-201ENST00000569130 274 ntBASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 AL109837.1-201ENST00000603272 613 ntBASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.76□□□□□ -0.05
TMEFF1Q8IYR6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms