Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 MIR770-201ENST00000390219 98 ntBASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 ELK1P1-201ENST00000485699 580 ntBASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 AC133539.2-201ENST00000604757 467 ntBASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC83Q8IWF9 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC83Q8IWF9 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC83Q8IWF9 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC83Q8IWF9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC83Q8IWF9 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC83Q8IWF9 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CCDC83Q8IWF9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.58■□□□□ 0.41
CCDC83Q8IWF9 LRRC59-203ENST00000576448 1531 ntBASIC17.58■□□□□ 0.41
CCDC83Q8IWF9 AC012617.1-204ENST00000586340 2305 ntBASIC17.58■□□□□ 0.41
CCDC83Q8IWF9 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 AC027796.2-201ENST00000575326 344 ntBASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 CTBP2P3-201ENST00000585629 1255 ntBASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 TMEM261P1-201ENST00000604899 340 ntBASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 AC004233.3-201ENST00000607794 1269 ntBASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 SALL4P5-201ENST00000419001 1760 ntBASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC83Q8IWF9 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 GIMAP3P-201ENST00000495150 836 ntBASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 API5-211ENST00000534695 560 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 WASH4P-201ENST00000564273 1246 ntBASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 CLUHP6-201ENST00000580789 941 ntBASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 AC138761.1-201ENST00000584393 385 ntBASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms