Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC132192.2-201ENST00000596206 1147 ntBASIC16.62■□□□□ 0.25
TRIM50Q86XT4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 AP001505.2-201ENST00000616815 443 ntBASIC16.62■□□□□ 0.25
TRIM50Q86XT4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 AC244394.1-201ENST00000435000 1665 ntBASIC16.62■□□□□ 0.25
TRIM50Q86XT4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 AC006058.4-201ENST00000624016 1670 ntBASIC16.62■□□□□ 0.25
TRIM50Q86XT4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 WASH3P-207ENST00000560956 1394 ntBASIC16.62■□□□□ 0.25
TRIM50Q86XT4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 AC007326.2-201ENST00000624224 7579 ntBASIC16.61■□□□□ 0.25
TRIM50Q86XT4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 AL662890.1-201ENST00000396818 632 ntBASIC16.61■□□□□ 0.25
TRIM50Q86XT4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 TUBB8P8-201ENST00000458717 1058 ntBASIC16.61■□□□□ 0.25
TRIM50Q86XT4 RN7SL11P-201ENST00000471305 293 ntBASIC16.61■□□□□ 0.25
TRIM50Q86XT4 RPL18P13-201ENST00000478088 569 ntBASIC16.61■□□□□ 0.25
TRIM50Q86XT4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 AC005324.6-201ENST00000587972 613 ntBASIC16.61■□□□□ 0.25
TRIM50Q86XT4 AC026740.1-201ENST00000607068 791 ntBASIC16.61■□□□□ 0.25
TRIM50Q86XT4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 AC068587.8-201ENST00000641239 219 ntBASIC16.61■□□□□ 0.25
TRIM50Q86XT4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 TUBBP5-203ENST00000508529 1334 ntBASIC16.61■□□□□ 0.25
TRIM50Q86XT4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM50Q86XT4 AC013268.4-201ENST00000637413 2228 ntBASIC16.61■□□□□ 0.25
TRIM50Q86XT4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 RN7SL774P-201ENST00000577467 290 ntBASIC16.6■□□□□ 0.25
TRIM50Q86XT4 MIR3619-201ENST00000579667 83 ntBASIC16.6■□□□□ 0.25
TRIM50Q86XT4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 AC097724.1-201ENST00000609581 426 ntBASIC16.6■□□□□ 0.25
TRIM50Q86XT4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms