Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRTM1Q86UE6 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRTM1Q86UE6 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRTM1Q86UE6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRTM1Q86UE6 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRTM1Q86UE6 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRTM1Q86UE6 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 AL353779.1-201ENST00000434793 351 ntBASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 AC005562.1-201ENST00000583030 3219 ntBASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 AC015818.8-201ENST00000587907 1519 ntBASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 RN7SL832P-201ENST00000607781 1756 ntBASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRTM1Q86UE6 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 TCAF1P1-201ENST00000414990 2232 ntBASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 AL138828.2-201ENST00000615812 383 ntBASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
LRRTM1Q86UE6 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms