Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 AC020910.6-201ENST00000623084 1459 ntBASIC16.8■□□□□ 0.28
SHC4Q6S5L8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 AC134312.5-201ENST00000568031 1313 ntBASIC16.8■□□□□ 0.28
SHC4Q6S5L8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 BAATP1-201ENST00000412284 1225 ntBASIC16.8■□□□□ 0.28
SHC4Q6S5L8 ACTG1P3-201ENST00000431775 1114 ntBASIC16.8■□□□□ 0.28
SHC4Q6S5L8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 AL391280.1-201ENST00000506969 1062 ntBASIC16.8■□□□□ 0.28
SHC4Q6S5L8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 AC103988.2-201ENST00000561804 725 ntBASIC16.8■□□□□ 0.28
SHC4Q6S5L8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 MIR5189-201ENST00000577370 114 ntBASIC16.8■□□□□ 0.28
SHC4Q6S5L8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 AC138466.3-201ENST00000619983 221 ntBASIC16.8■□□□□ 0.28
SHC4Q6S5L8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC4Q6S5L8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 AC009093.2-202ENST00000620513 2079 ntBASIC16.79■□□□□ 0.28
SHC4Q6S5L8 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.79■□□□□ 0.28
SHC4Q6S5L8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC4Q6S5L8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 AC010327.5-201ENST00000586923 3061 ntBASIC16.78■□□□□ 0.28
SHC4Q6S5L8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.78■□□□□ 0.28
SHC4Q6S5L8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms