Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CELP-201ENST00000411440 1249 ntTSL 5 BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.41■□□□□ 0.54
RC3H1Q5TC82 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 AC093909.3-201ENST00000504783 336 ntBASIC18.41■□□□□ 0.54
RC3H1Q5TC82 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 AC006504.5-208ENST00000588784 2401 ntBASIC18.41■□□□□ 0.54
RC3H1Q5TC82 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.41■□□□□ 0.54
RC3H1Q5TC82 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 BRD7P5-201ENST00000299197 1822 ntBASIC18.4■□□□□ 0.54
RC3H1Q5TC82 AC021305.1-201ENST00000520656 1514 ntBASIC18.4■□□□□ 0.54
RC3H1Q5TC82 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 AC011471.3-201ENST00000623576 402 ntBASIC18.4■□□□□ 0.54
RC3H1Q5TC82 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RC3H1Q5TC82 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
RC3H1Q5TC82 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RC3H1Q5TC82 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
RC3H1Q5TC82 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RC3H1Q5TC82 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RC3H1Q5TC82 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 HCG27-204ENST00000424675 895 ntTSL 3 BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 AC140658.4-201ENST00000561990 352 ntBASIC18.39■□□□□ 0.53
RC3H1Q5TC82 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms