Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.41□□□□□ -0.26
RNFT1Q5M7Z0 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RNFT1Q5M7Z0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNFT1Q5M7Z0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNFT1Q5M7Z0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNFT1Q5M7Z0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 AC012441.2-201ENST00000444843 739 ntBASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 AC009779.1-201ENST00000551138 283 ntBASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 AL132994.2-201ENST00000603120 687 ntBASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 AL133445.2-201ENST00000611191 527 ntBASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 MIR6720-201ENST00000611664 98 ntBASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 AL136295.7-201ENST00000619226 1200 ntBASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 AL157791.1-201ENST00000553667 1699 ntBASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RNFT1Q5M7Z0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
RNFT1Q5M7Z0 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 AC092506.1-202ENST00000401022 528 ntBASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 AC134698.3-201ENST00000523880 214 ntBASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 AC027601.3-201ENST00000622907 509 ntBASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms