Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MIR3619-201ENST00000579667 83 ntBASIC15.83■□□□□ 0.12
SOX4Q06945 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.83■□□□□ 0.12
SOX4Q06945 AC009884.2-201ENST00000603110 324 ntBASIC15.83■□□□□ 0.12
SOX4Q06945 AL132994.2-201ENST00000603120 687 ntBASIC15.83■□□□□ 0.12
SOX4Q06945 AC138627.1-207ENST00000641560 1006 ntBASIC15.83■□□□□ 0.12
SOX4Q06945 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.83■□□□□ 0.12
SOX4Q06945 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SOX4Q06945 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX4Q06945 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX4Q06945 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX4Q06945 AC008132.1-202ENST00000342005 1389 ntBASIC15.83■□□□□ 0.12
SOX4Q06945 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX4Q06945 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX4Q06945 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.83■□□□□ 0.12
SOX4Q06945 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX4Q06945 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SOX4Q06945 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.83■□□□□ 0.12
SOX4Q06945 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.83■□□□□ 0.12
SOX4Q06945 AC144522.1-201ENST00000625111 1658 ntBASIC15.83■□□□□ 0.12
SOX4Q06945 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
SOX4Q06945 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX4Q06945 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX4Q06945 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX4Q06945 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX4Q06945 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX4Q06945 AC139712.1-201ENST00000378256 1875 ntBASIC15.82■□□□□ 0.12
SOX4Q06945 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX4Q06945 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX4Q06945 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SOX4Q06945 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX4Q06945 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX4Q06945 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX4Q06945 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SOX4Q06945 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX4Q06945 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX4Q06945 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX4Q06945 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SOX4Q06945 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX4Q06945 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.82■□□□□ 0.12
SOX4Q06945 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX4Q06945 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SOX4Q06945 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.82■□□□□ 0.12
SOX4Q06945 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.82■□□□□ 0.12
SOX4Q06945 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX4Q06945 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.82■□□□□ 0.12
SOX4Q06945 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX4Q06945 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
SOX4Q06945 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX4Q06945 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX4Q06945 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX4Q06945 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.82■□□□□ 0.12
SOX4Q06945 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX4Q06945 AP001505.2-201ENST00000616815 443 ntBASIC15.82■□□□□ 0.12
SOX4Q06945 AC091544.8-201ENST00000619490 361 ntBASIC15.82■□□□□ 0.12
SOX4Q06945 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX4Q06945 AL805961.1-203ENST00000641078 1258 ntBASIC15.82■□□□□ 0.12
SOX4Q06945 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX4Q06945 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SOX4Q06945 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SOX4Q06945 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX4Q06945 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX4Q06945 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX4Q06945 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX4Q06945 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX4Q06945 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.82■□□□□ 0.12
SOX4Q06945 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX4Q06945 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX4Q06945 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SOX4Q06945 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SOX4Q06945 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX4Q06945 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX4Q06945 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX4Q06945 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX4Q06945 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX4Q06945 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SOX4Q06945 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX4Q06945 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX4Q06945 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.81■□□□□ 0.12
SOX4Q06945 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SOX4Q06945 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX4Q06945 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.81■□□□□ 0.12
SOX4Q06945 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.81■□□□□ 0.12
SOX4Q06945 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.81■□□□□ 0.12
SOX4Q06945 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.81■□□□□ 0.12
SOX4Q06945 AC011742.3-201ENST00000439053 820 ntBASIC15.81■□□□□ 0.12
SOX4Q06945 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.81■□□□□ 0.12
SOX4Q06945 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.81■□□□□ 0.12
SOX4Q06945 RN7SL11P-201ENST00000471305 293 ntBASIC15.81■□□□□ 0.12
SOX4Q06945 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.81■□□□□ 0.12
SOX4Q06945 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX4Q06945 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SOX4Q06945 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.81■□□□□ 0.12
SOX4Q06945 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SOX4Q06945 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.81■□□□□ 0.12
SOX4Q06945 AC097724.1-201ENST00000609581 426 ntBASIC15.81■□□□□ 0.12
SOX4Q06945 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SOX4Q06945 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SOX4Q06945 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.81■□□□□ 0.12
SOX4Q06945 CICP14-201ENST00000629111 2732 ntBASIC15.81■□□□□ 0.12
SOX4Q06945 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms