Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TPM4P67936 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM4P67936 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
TPM4P67936 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TPM4P67936 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.83■□□□□ 0.29
TPM4P67936 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TPM4P67936 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
TPM4P67936 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
TPM4P67936 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TPM4P67936 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TPM4P67936 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM4P67936 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM4P67936 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TPM4P67936 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.83■□□□□ 0.28
TPM4P67936 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM4P67936 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.83■□□□□ 0.28
TPM4P67936 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.83■□□□□ 0.28
TPM4P67936 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.83■□□□□ 0.28
TPM4P67936 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TPM4P67936 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TPM4P67936 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.83■□□□□ 0.28
TPM4P67936 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM4P67936 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.83■□□□□ 0.28
TPM4P67936 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TPM4P67936 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TPM4P67936 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.83■□□□□ 0.28
TPM4P67936 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.83■□□□□ 0.28
TPM4P67936 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.83■□□□□ 0.28
TPM4P67936 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.83■□□□□ 0.28
TPM4P67936 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM4P67936 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TPM4P67936 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TPM4P67936 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TPM4P67936 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TPM4P67936 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM4P67936 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM4P67936 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TPM4P67936 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM4P67936 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM4P67936 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TPM4P67936 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM4P67936 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM4P67936 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM4P67936 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.82■□□□□ 0.28
TPM4P67936 GPS2P2-201ENST00000430745 888 ntBASIC16.82■□□□□ 0.28
TPM4P67936 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.82■□□□□ 0.28
TPM4P67936 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 AC005829.1-201ENST00000570002 483 ntBASIC16.82■□□□□ 0.28
TPM4P67936 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
TPM4P67936 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 AC000095.1-201ENST00000603208 874 ntBASIC16.82■□□□□ 0.28
TPM4P67936 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TPM4P67936 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM4P67936 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM4P67936 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TPM4P67936 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TPM4P67936 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TPM4P67936 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
TPM4P67936 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TPM4P67936 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TPM4P67936 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM4P67936 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM4P67936 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM4P67936 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.81■□□□□ 0.28
TPM4P67936 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.81■□□□□ 0.28
TPM4P67936 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM4P67936 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms