Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SEC61A1P61619 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SEC61A1P61619 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SEC61A1P61619 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.2□□□□□ -0.3
SEC61A1P61619 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.2□□□□□ -0.3
SEC61A1P61619 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SEC61A1P61619 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SEC61A1P61619 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.2□□□□□ -0.3
SEC61A1P61619 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 AC074338.1-201ENST00000416825 156 ntBASIC13.2□□□□□ -0.3
SEC61A1P61619 PHKG1P2-201ENST00000457537 863 ntBASIC13.2□□□□□ -0.3
SEC61A1P61619 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.2□□□□□ -0.3
SEC61A1P61619 RN7SL692P-201ENST00000464677 288 ntBASIC13.2□□□□□ -0.3
SEC61A1P61619 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.2□□□□□ -0.3
SEC61A1P61619 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.2□□□□□ -0.3
SEC61A1P61619 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.2□□□□□ -0.3
SEC61A1P61619 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.2□□□□□ -0.3
SEC61A1P61619 AC140912.1-201ENST00000577171 1054 ntBASIC13.2□□□□□ -0.3
SEC61A1P61619 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SEC61A1P61619 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.2□□□□□ -0.3
SEC61A1P61619 AL035252.4-201ENST00000624174 288 ntBASIC13.2□□□□□ -0.3
SEC61A1P61619 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.2□□□□□ -0.3
SEC61A1P61619 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.2□□□□□ -0.3
SEC61A1P61619 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.2□□□□□ -0.3
SEC61A1P61619 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
SEC61A1P61619 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.2□□□□□ -0.3
SEC61A1P61619 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.2□□□□□ -0.3
SEC61A1P61619 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
SEC61A1P61619 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.2□□□□□ -0.3
SEC61A1P61619 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.19□□□□□ -0.3
SEC61A1P61619 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 CR383656.2-201ENST00000548656 2254 ntBASIC13.19□□□□□ -0.3
SEC61A1P61619 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.19□□□□□ -0.3
SEC61A1P61619 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SEC61A1P61619 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC61A1P61619 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.19□□□□□ -0.3
SEC61A1P61619 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC61A1P61619 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SEC61A1P61619 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.19□□□□□ -0.3
SEC61A1P61619 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 DFFBP1-201ENST00000433250 979 ntBASIC13.19□□□□□ -0.3
SEC61A1P61619 AL353779.1-201ENST00000434793 351 ntBASIC13.19□□□□□ -0.3
SEC61A1P61619 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.19□□□□□ -0.3
SEC61A1P61619 TARDBPP1-201ENST00000442013 1203 ntBASIC13.19□□□□□ -0.3
SEC61A1P61619 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC61A1P61619 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.19□□□□□ -0.3
SEC61A1P61619 AC093004.1-201ENST00000508850 424 ntBASIC13.19□□□□□ -0.3
SEC61A1P61619 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC61A1P61619 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC61A1P61619 TP53TG3HP-202ENST00000569755 579 ntBASIC13.19□□□□□ -0.3
SEC61A1P61619 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
SEC61A1P61619 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.19□□□□□ -0.3
SEC61A1P61619 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.19□□□□□ -0.3
SEC61A1P61619 AC008494.3-201ENST00000606615 944 ntBASIC13.19□□□□□ -0.3
SEC61A1P61619 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC61A1P61619 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SEC61A1P61619 AC007431.3-201ENST00000623221 587 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms