Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
UBE2NP61088 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UBE2NP61088 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 MIR193BHG-211ENST00000641433 5365 ntBASIC13.19□□□□□ -0.3
UBE2NP61088 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UBE2NP61088 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
UBE2NP61088 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.19□□□□□ -0.3
UBE2NP61088 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2NP61088 CD8B2-202ENST00000417670 633 ntBASIC13.19□□□□□ -0.3
UBE2NP61088 CNN2P8-201ENST00000421872 913 ntBASIC13.19□□□□□ -0.3
UBE2NP61088 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.19□□□□□ -0.3
UBE2NP61088 AL590640.2-201ENST00000457038 527 ntBASIC13.19□□□□□ -0.3
UBE2NP61088 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
UBE2NP61088 AC078819.1-201ENST00000547454 765 ntBASIC13.19□□□□□ -0.3
UBE2NP61088 AC012085.1-201ENST00000548270 765 ntBASIC13.19□□□□□ -0.3
UBE2NP61088 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UBE2NP61088 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.19□□□□□ -0.3
UBE2NP61088 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.19□□□□□ -0.3
UBE2NP61088 COX11-210ENST00000639671 696 ntBASIC13.19□□□□□ -0.3
UBE2NP61088 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.19□□□□□ -0.3
UBE2NP61088 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
UBE2NP61088 C8orf49-201ENST00000525043 1968 ntBASIC13.19□□□□□ -0.3
UBE2NP61088 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.19□□□□□ -0.3
UBE2NP61088 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UBE2NP61088 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.19□□□□□ -0.3
UBE2NP61088 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.19□□□□□ -0.3
UBE2NP61088 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2NP61088 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2NP61088 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.19□□□□□ -0.3
UBE2NP61088 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
UBE2NP61088 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2NP61088 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.19□□□□□ -0.3
UBE2NP61088 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UBE2NP61088 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
UBE2NP61088 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2NP61088 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2NP61088 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBE2NP61088 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2NP61088 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
UBE2NP61088 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2NP61088 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
UBE2NP61088 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2NP61088 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
UBE2NP61088 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2NP61088 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2NP61088 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.18□□□□□ -0.3
UBE2NP61088 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
UBE2NP61088 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2NP61088 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2NP61088 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.18□□□□□ -0.3
UBE2NP61088 AC006453.4-201ENST00000636949 1252 ntBASIC13.18□□□□□ -0.3
UBE2NP61088 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
UBE2NP61088 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2NP61088 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2NP61088 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.18□□□□□ -0.3
UBE2NP61088 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2NP61088 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
UBE2NP61088 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBE2NP61088 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
UBE2NP61088 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2NP61088 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2NP61088 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms