Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC11.72□□□□□ -0.53
ERVFC1-1P60608 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 MIR574-201ENST00000385209 96 ntBASIC11.71□□□□□ -0.53
ERVFC1-1P60608 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 MIR940-201ENST00000401276 94 ntBASIC11.71□□□□□ -0.53
ERVFC1-1P60608 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 GHSR-202ENST00000427970 912 ntBASIC11.71□□□□□ -0.53
ERVFC1-1P60608 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 SLC25A1P1-201ENST00000528351 927 ntBASIC11.71□□□□□ -0.53
ERVFC1-1P60608 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ERVFC1-1P60608 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.71□□□□□ -0.54
ERVFC1-1P60608 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ERVFC1-1P60608 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
ERVFC1-1P60608 PTPRVP-205ENST00000641549 5067 ntBASIC11.71□□□□□ -0.54
ERVFC1-1P60608 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ERVFC1-1P60608 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ERVFC1-1P60608 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.71□□□□□ -0.54
ERVFC1-1P60608 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
ERVFC1-1P60608 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.71□□□□□ -0.54
ERVFC1-1P60608 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ERVFC1-1P60608 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 AL513480.1-201ENST00000451731 511 ntBASIC11.7□□□□□ -0.54
ERVFC1-1P60608 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.7□□□□□ -0.54
ERVFC1-1P60608 TPT1P11-201ENST00000458482 498 ntBASIC11.7□□□□□ -0.54
ERVFC1-1P60608 AC092910.1-201ENST00000482027 1129 ntBASIC11.7□□□□□ -0.54
ERVFC1-1P60608 AC136632.2-201ENST00000512891 861 ntBASIC11.7□□□□□ -0.54
ERVFC1-1P60608 AC109635.5-201ENST00000533593 962 ntBASIC11.7□□□□□ -0.54
ERVFC1-1P60608 AC092865.5-201ENST00000545435 363 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms