Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 AC007292.2-201ENST00000593524 1812 ntBASIC13.97□□□□□ -0.17
EFNA3P52797 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
EFNA3P52797 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.97□□□□□ -0.17
EFNA3P52797 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
EFNA3P52797 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 SALL4P5-201ENST00000419001 1760 ntBASIC13.97□□□□□ -0.17
EFNA3P52797 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
EFNA3P52797 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.97□□□□□ -0.17
EFNA3P52797 MIR1247-201ENST00000408206 136 ntBASIC13.97□□□□□ -0.17
EFNA3P52797 AC006033.1-201ENST00000440505 426 ntBASIC13.97□□□□□ -0.17
EFNA3P52797 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.97□□□□□ -0.17
EFNA3P52797 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.97□□□□□ -0.17
EFNA3P52797 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.97□□□□□ -0.17
EFNA3P52797 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.97□□□□□ -0.17
EFNA3P52797 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.97□□□□□ -0.17
EFNA3P52797 AC243960.2-201ENST00000600996 747 ntBASIC13.97□□□□□ -0.17
EFNA3P52797 AC244157.2-201ENST00000616239 1006 ntBASIC13.97□□□□□ -0.17
EFNA3P52797 MIR6787-201ENST00000616675 61 ntBASIC13.97□□□□□ -0.17
EFNA3P52797 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
EFNA3P52797 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
EFNA3P52797 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 LINC01101-201ENST00000622953 1884 ntBASIC13.97□□□□□ -0.17
EFNA3P52797 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
EFNA3P52797 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
EFNA3P52797 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.97□□□□□ -0.17
EFNA3P52797 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
EFNA3P52797 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
EFNA3P52797 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNA3P52797 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 AC020907.1-201ENST00000616460 1350 ntBASIC13.96□□□□□ -0.17
EFNA3P52797 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNA3P52797 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.96□□□□□ -0.17
EFNA3P52797 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.96□□□□□ -0.17
EFNA3P52797 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.96□□□□□ -0.17
EFNA3P52797 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
EFNA3P52797 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNA3P52797 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNA3P52797 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.96□□□□□ -0.17
EFNA3P52797 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
EFNA3P52797 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
EFNA3P52797 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
EFNA3P52797 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNA3P52797 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNA3P52797 AL354877.1-201ENST00000424412 413 ntBASIC13.96□□□□□ -0.17
EFNA3P52797 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNA3P52797 PFN1P12-201ENST00000455938 534 ntBASIC13.96□□□□□ -0.17
EFNA3P52797 AC131206.1-201ENST00000538078 1211 ntBASIC13.96□□□□□ -0.17
EFNA3P52797 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.96□□□□□ -0.17
EFNA3P52797 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNA3P52797 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.96□□□□□ -0.17
EFNA3P52797 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.96□□□□□ -0.17
EFNA3P52797 AC244093.1-201ENST00000610837 814 ntBASIC13.96□□□□□ -0.17
EFNA3P52797 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.96□□□□□ -0.17
EFNA3P52797 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
EFNA3P52797 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
EFNA3P52797 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
EFNA3P52797 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNA3P52797 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA3P52797 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
EFNA3P52797 E2F3P2-201ENST00000447755 1422 ntBASIC13.96□□□□□ -0.18
EFNA3P52797 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.96□□□□□ -0.18
EFNA3P52797 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
EFNA3P52797 PCDHA3-202ENST00000532566 4594 ntBASIC13.96□□□□□ -0.18
EFNA3P52797 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
EFNA3P52797 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
EFNA3P52797 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
EFNA3P52797 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.95□□□□□ -0.18
EFNA3P52797 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms