Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.02■□□□□ 0.16
SSR1P43307 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSR1P43307 GNAQP1-201ENST00000444815 1067 ntBASIC16.02■□□□□ 0.16
SSR1P43307 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.02■□□□□ 0.16
SSR1P43307 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.02■□□□□ 0.16
SSR1P43307 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SSR1P43307 AL049840.4-201ENST00000602422 811 ntBASIC16.02■□□□□ 0.16
SSR1P43307 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSR1P43307 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.02■□□□□ 0.15
SSR1P43307 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.02■□□□□ 0.15
SSR1P43307 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
SSR1P43307 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SSR1P43307 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
SSR1P43307 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.02■□□□□ 0.15
SSR1P43307 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SSR1P43307 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.02■□□□□ 0.15
SSR1P43307 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SSR1P43307 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.02■□□□□ 0.15
SSR1P43307 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SSR1P43307 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SSR1P43307 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.02■□□□□ 0.15
SSR1P43307 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SSR1P43307 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SSR1P43307 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SSR1P43307 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SSR1P43307 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.02■□□□□ 0.15
SSR1P43307 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 AC140479.7-201ENST00000636301 2332 ntBASIC16.01■□□□□ 0.15
SSR1P43307 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SSR1P43307 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
SSR1P43307 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 AC104457.1-201ENST00000401024 814 ntBASIC16.01■□□□□ 0.15
SSR1P43307 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.01■□□□□ 0.15
SSR1P43307 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.01■□□□□ 0.15
SSR1P43307 VDAC1P7-201ENST00000462417 847 ntBASIC16.01■□□□□ 0.15
SSR1P43307 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.01■□□□□ 0.15
SSR1P43307 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.01■□□□□ 0.15
SSR1P43307 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.01■□□□□ 0.15
SSR1P43307 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.01■□□□□ 0.15
SSR1P43307 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.01■□□□□ 0.15
SSR1P43307 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.01■□□□□ 0.15
SSR1P43307 RARRES2P5-201ENST00000564013 466 ntBASIC16.01■□□□□ 0.15
SSR1P43307 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.01■□□□□ 0.15
SSR1P43307 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.01■□□□□ 0.15
SSR1P43307 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.01■□□□□ 0.15
SSR1P43307 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
SSR1P43307 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SSR1P43307 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.01■□□□□ 0.15
SSR1P43307 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SSR1P43307 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.01■□□□□ 0.15
SSR1P43307 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC16.01■□□□□ 0.15
SSR1P43307 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSR1P43307 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16■□□□□ 0.15
SSR1P43307 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16■□□□□ 0.15
SSR1P43307 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
SSR1P43307 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16■□□□□ 0.15
SSR1P43307 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16■□□□□ 0.15
SSR1P43307 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 MRPS18AP1-201ENST00000414458 589 ntBASIC16■□□□□ 0.15
SSR1P43307 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16■□□□□ 0.15
SSR1P43307 PMS2P2-201ENST00000425039 1128 ntBASIC16■□□□□ 0.15
SSR1P43307 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16■□□□□ 0.15
SSR1P43307 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 RN7SL399P-201ENST00000471648 279 ntBASIC16■□□□□ 0.15
SSR1P43307 INGX-202ENST00000489074 768 ntBASIC16■□□□□ 0.15
SSR1P43307 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16■□□□□ 0.15
SSR1P43307 RFPL4AP1-201ENST00000530883 850 ntBASIC16■□□□□ 0.15
SSR1P43307 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16■□□□□ 0.15
SSR1P43307 AC107373.2-201ENST00000607735 490 ntBASIC16■□□□□ 0.15
SSR1P43307 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC16■□□□□ 0.15
SSR1P43307 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSR1P43307 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms