Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC1A1P43005 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 AL359881.3-201ENST00000602640 1721 ntBASIC15.65■□□□□ 0.1
SLC1A1P43005 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC1A1P43005 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SLC1A1P43005 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC1A1P43005 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A1P43005 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC1A1P43005 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC1A1P43005 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC1A1P43005 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC1A1P43005 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 AL162726.2-201ENST00000438986 1017 ntBASIC15.65■□□□□ 0.1
SLC1A1P43005 CLUHP6-201ENST00000580789 941 ntBASIC15.65■□□□□ 0.1
SLC1A1P43005 AC138761.1-201ENST00000584393 385 ntBASIC15.65■□□□□ 0.1
SLC1A1P43005 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A1P43005 CHCHD2P3-201ENST00000603038 451 ntBASIC15.65■□□□□ 0.1
SLC1A1P43005 AC004233.3-201ENST00000607794 1269 ntBASIC15.65■□□□□ 0.1
SLC1A1P43005 GPALPP1-207ENST00000611650 899 ntBASIC15.65■□□□□ 0.1
SLC1A1P43005 MIR6074-201ENST00000612054 107 ntBASIC15.65■□□□□ 0.1
SLC1A1P43005 AJ011932.1-201ENST00000621707 465 ntBASIC15.65■□□□□ 0.1
SLC1A1P43005 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
SLC1A1P43005 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A1P43005 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC1A1P43005 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A1P43005 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SLC1A1P43005 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SLC1A1P43005 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A1P43005 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
SLC1A1P43005 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A1P43005 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A1P43005 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A1P43005 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A1P43005 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A1P43005 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A1P43005 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A1P43005 AC041040.2-201ENST00000622926 2899 ntBASIC15.64■□□□□ 0.09
SLC1A1P43005 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A1P43005 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A1P43005 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A1P43005 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC1A1P43005 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC1A1P43005 FAM207CP-201ENST00000443486 507 ntBASIC15.64■□□□□ 0.09
SLC1A1P43005 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A1P43005 AC022137.2-201ENST00000503482 481 ntBASIC15.64■□□□□ 0.09
SLC1A1P43005 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A1P43005 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A1P43005 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
SLC1A1P43005 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A1P43005 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A1P43005 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A1P43005 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A1P43005 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A1P43005 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC1A1P43005 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms