Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 AC020658.6-201ENST00000623564 1870 ntBASIC25.36■■□□□ 1.65
NCAPD3P42695 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NCAPD3P42695 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NCAPD3P42695 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NCAPD3P42695 AC011431.1-201ENST00000512971 230 ntBASIC25.36■■□□□ 1.65
NCAPD3P42695 LY6E-215ENST00000523847 427 ntTSL 3 BASIC25.36■■□□□ 1.65
NCAPD3P42695 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC25.36■■□□□ 1.65
NCAPD3P42695 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC25.36■■□□□ 1.65
NCAPD3P42695 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
NCAPD3P42695 BX322534.1-201ENST00000635574 241 ntBASIC25.36■■□□□ 1.65
NCAPD3P42695 AC215524.1-201ENST00000635696 241 ntBASIC25.36■■□□□ 1.65
NCAPD3P42695 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
NCAPD3P42695 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NCAPD3P42695 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC25.36■■□□□ 1.65
NCAPD3P42695 AC007952.5-201ENST00000572818 1486 ntBASIC25.36■■□□□ 1.65
NCAPD3P42695 FAM226B-201ENST00000602508 1490 ntBASIC25.36■■□□□ 1.65
NCAPD3P42695 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NCAPD3P42695 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NCAPD3P42695 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC25.36■■□□□ 1.65
NCAPD3P42695 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
NCAPD3P42695 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NCAPD3P42695 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NCAPD3P42695 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NCAPD3P42695 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC25.35■■□□□ 1.65
NCAPD3P42695 FAM197Y6-201ENST00000420524 766 ntBASIC25.35■■□□□ 1.65
NCAPD3P42695 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC25.35■■□□□ 1.65
NCAPD3P42695 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC25.35■■□□□ 1.65
NCAPD3P42695 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
NCAPD3P42695 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
NCAPD3P42695 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC25.35■■□□□ 1.65
NCAPD3P42695 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NCAPD3P42695 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC25.35■■□□□ 1.65
NCAPD3P42695 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
NCAPD3P42695 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
NCAPD3P42695 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NCAPD3P42695 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC25.35■■□□□ 1.65
NCAPD3P42695 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
NCAPD3P42695 NKILA-202ENST00000614771 2598 ntBASIC25.35■■□□□ 1.65
NCAPD3P42695 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NCAPD3P42695 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC25.35■■□□□ 1.65
NCAPD3P42695 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NCAPD3P42695 KRT8P43-201ENST00000406052 1458 ntBASIC25.35■■□□□ 1.65
NCAPD3P42695 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NCAPD3P42695 HNRNPA1P21-201ENST00000424115 961 ntBASIC25.34■■□□□ 1.65
NCAPD3P42695 AC093300.1-201ENST00000510368 1201 ntBASIC25.34■■□□□ 1.65
NCAPD3P42695 BMF-206ENST00000558774 671 ntTSL 3 BASIC25.34■■□□□ 1.65
NCAPD3P42695 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC25.34■■□□□ 1.65
NCAPD3P42695 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC25.34■■□□□ 1.65
NCAPD3P42695 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
NCAPD3P42695 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC25.34■■□□□ 1.65
NCAPD3P42695 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
NCAPD3P42695 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
NCAPD3P42695 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC25.34■■□□□ 1.65
NCAPD3P42695 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC25.34■■□□□ 1.65
NCAPD3P42695 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
NCAPD3P42695 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC25.34■■□□□ 1.65
NCAPD3P42695 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
NCAPD3P42695 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC25.34■■□□□ 1.65
NCAPD3P42695 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NCAPD3P42695 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC25.34■■□□□ 1.65
NCAPD3P42695 CCL25-202ENST00000315626 450 ntTSL 2 BASIC25.34■■□□□ 1.65
NCAPD3P42695 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
NCAPD3P42695 AL161932.2-201ENST00000435436 679 ntBASIC25.34■■□□□ 1.65
NCAPD3P42695 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC25.34■■□□□ 1.65
NCAPD3P42695 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
NCAPD3P42695 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC25.34■■□□□ 1.65
NCAPD3P42695 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC25.34■■□□□ 1.65
NCAPD3P42695 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC25.34■■□□□ 1.65
NCAPD3P42695 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
NCAPD3P42695 AL357143.1-203ENST00000639750 881 ntBASIC25.34■■□□□ 1.65
NCAPD3P42695 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NCAPD3P42695 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC25.33■■□□□ 1.65
NCAPD3P42695 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NCAPD3P42695 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NCAPD3P42695 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC25.33■■□□□ 1.65
NCAPD3P42695 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
NCAPD3P42695 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NCAPD3P42695 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NCAPD3P42695 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC25.33■■□□□ 1.65
NCAPD3P42695 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NCAPD3P42695 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC25.33■■□□□ 1.65
NCAPD3P42695 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NCAPD3P42695 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
NCAPD3P42695 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC25.33■■□□□ 1.65
NCAPD3P42695 RHOQP2-201ENST00000449922 579 ntBASIC25.33■■□□□ 1.65
NCAPD3P42695 MAX-218ENST00000557746 571 ntTSL 4 BASIC25.33■■□□□ 1.65
NCAPD3P42695 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC25.33■■□□□ 1.65
NCAPD3P42695 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.64
NCAPD3P42695 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
NCAPD3P42695 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
NCAPD3P42695 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
NCAPD3P42695 CCT8L1P-201ENST00000465400 1674 ntBASIC25.33■■□□□ 1.64
NCAPD3P42695 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC25.32■■□□□ 1.64
NCAPD3P42695 C18orf15-201ENST00000623680 2534 ntBASIC25.32■■□□□ 1.64
NCAPD3P42695 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC25.32■■□□□ 1.64
NCAPD3P42695 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
NCAPD3P42695 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
NCAPD3P42695 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC25.32■■□□□ 1.64
NCAPD3P42695 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC25.32■■□□□ 1.64
NCAPD3P42695 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms