Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.37□□□□□ -0.11
PTX3P26022 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.37□□□□□ -0.11
PTX3P26022 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PTX3P26022 AC010319.3-201ENST00000597028 470 ntBASIC14.37□□□□□ -0.11
PTX3P26022 AC025048.6-201ENST00000634326 1161 ntBASIC14.37□□□□□ -0.11
PTX3P26022 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.37□□□□□ -0.11
PTX3P26022 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
PTX3P26022 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PTX3P26022 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
PTX3P26022 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.37□□□□□ -0.11
PTX3P26022 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.37□□□□□ -0.11
PTX3P26022 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PTX3P26022 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PTX3P26022 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PTX3P26022 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.36□□□□□ -0.11
PTX3P26022 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
PTX3P26022 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
PTX3P26022 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PTX3P26022 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.36□□□□□ -0.11
PTX3P26022 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.36□□□□□ -0.11
PTX3P26022 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.36□□□□□ -0.11
PTX3P26022 FO681548.1-201ENST00000455617 1132 ntBASIC14.36□□□□□ -0.11
PTX3P26022 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PTX3P26022 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.36□□□□□ -0.11
PTX3P26022 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.36□□□□□ -0.11
PTX3P26022 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
PTX3P26022 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 AC145423.3-201ENST00000615987 467 ntBASIC14.36□□□□□ -0.11
PTX3P26022 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
PTX3P26022 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PTX3P26022 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
PTX3P26022 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PTX3P26022 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 SALL4P5-201ENST00000419001 1760 ntBASIC14.36□□□□□ -0.11
PTX3P26022 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PTX3P26022 AL137784.3-201ENST00000623858 2288 ntBASIC14.36□□□□□ -0.11
PTX3P26022 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.36□□□□□ -0.11
PTX3P26022 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PTX3P26022 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
PTX3P26022 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTX3P26022 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.36□□□□□ -0.11
PTX3P26022 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.36□□□□□ -0.11
PTX3P26022 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PTX3P26022 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.35□□□□□ -0.11
PTX3P26022 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PTX3P26022 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.35□□□□□ -0.11
PTX3P26022 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.35□□□□□ -0.11
PTX3P26022 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PTX3P26022 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.35□□□□□ -0.11
PTX3P26022 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.35□□□□□ -0.11
PTX3P26022 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.35□□□□□ -0.11
PTX3P26022 AC068587.3-201ENST00000526613 355 ntBASIC14.35□□□□□ -0.11
PTX3P26022 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.35□□□□□ -0.11
PTX3P26022 MIR5189-201ENST00000577370 114 ntBASIC14.35□□□□□ -0.11
PTX3P26022 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 AL358472.5-202ENST00000641448 1267 ntBASIC14.35□□□□□ -0.11
PTX3P26022 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms