Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.55□□□□□ -0.56
RAB4AP20338 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB4AP20338 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB4AP20338 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.54□□□□□ -0.56
RAB4AP20338 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 UBTFL8-201ENST00000426903 2112 ntBASIC11.54□□□□□ -0.56
RAB4AP20338 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
RAB4AP20338 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.54□□□□□ -0.56
RAB4AP20338 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
RAB4AP20338 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
RAB4AP20338 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.54□□□□□ -0.56
RAB4AP20338 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 AC112176.1-201ENST00000565428 3024 ntBASIC11.54□□□□□ -0.56
RAB4AP20338 AC011481.3-201ENST00000623895 5594 ntBASIC11.54□□□□□ -0.56
RAB4AP20338 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.54□□□□□ -0.56
RAB4AP20338 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 HMGA1P7-201ENST00000406908 502 ntBASIC11.54□□□□□ -0.56
RAB4AP20338 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.54□□□□□ -0.56
RAB4AP20338 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 GPX1P2-201ENST00000429271 606 ntBASIC11.54□□□□□ -0.56
RAB4AP20338 DUSP5P1-201ENST00000441325 1139 ntBASIC11.54□□□□□ -0.56
RAB4AP20338 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 AC093827.2-201ENST00000512654 315 ntBASIC11.54□□□□□ -0.56
RAB4AP20338 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.54□□□□□ -0.56
RAB4AP20338 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
RAB4AP20338 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 AC018892.3-201ENST00000623986 2499 ntBASIC11.54□□□□□ -0.56
RAB4AP20338 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
RAB4AP20338 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.54□□□□□ -0.56
RAB4AP20338 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.54□□□□□ -0.56
RAB4AP20338 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 AC113367.3-201ENST00000508316 1912 ntBASIC11.54□□□□□ -0.56
RAB4AP20338 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.54□□□□□ -0.56
RAB4AP20338 AL589702.1-201ENST00000641229 1509 ntBASIC11.54□□□□□ -0.56
RAB4AP20338 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC11.54□□□□□ -0.56
RAB4AP20338 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB4AP20338 AP002008.2-201ENST00000635926 4870 ntBASIC11.54□□□□□ -0.56
RAB4AP20338 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB4AP20338 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
RAB4AP20338 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
RAB4AP20338 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB4AP20338 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
RAB4AP20338 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB4AP20338 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB4AP20338 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 250.2 ms