Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.22□□□□□ -0.13
CCNA2P20248 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.22□□□□□ -0.13
CCNA2P20248 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.22□□□□□ -0.13
CCNA2P20248 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.22□□□□□ -0.13
CCNA2P20248 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 Z97205.2-201ENST00000564697 1639 ntBASIC14.22□□□□□ -0.13
CCNA2P20248 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.22□□□□□ -0.13
CCNA2P20248 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.22□□□□□ -0.13
CCNA2P20248 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CCNA2P20248 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNA2P20248 AC105206.1-202ENST00000314927 2368 ntBASIC14.22□□□□□ -0.13
CCNA2P20248 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNA2P20248 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CCNA2P20248 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.21□□□□□ -0.13
CCNA2P20248 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
CCNA2P20248 AP001267.2-201ENST00000532619 2086 ntBASIC14.21□□□□□ -0.13
CCNA2P20248 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.21□□□□□ -0.13
CCNA2P20248 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.21□□□□□ -0.13
CCNA2P20248 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.21□□□□□ -0.13
CCNA2P20248 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.21□□□□□ -0.13
CCNA2P20248 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.21□□□□□ -0.13
CCNA2P20248 AC005498.2-205ENST00000593218 784 ntBASIC14.21□□□□□ -0.13
CCNA2P20248 AC074044.1-201ENST00000609673 707 ntBASIC14.21□□□□□ -0.13
CCNA2P20248 AC004461.2-201ENST00000629517 803 ntBASIC14.21□□□□□ -0.13
CCNA2P20248 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.21□□□□□ -0.13
CCNA2P20248 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.21□□□□□ -0.13
CCNA2P20248 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.21□□□□□ -0.13
CCNA2P20248 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.21□□□□□ -0.13
CCNA2P20248 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.21□□□□□ -0.13
CCNA2P20248 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNA2P20248 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CCNA2P20248 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.21□□□□□ -0.14
CCNA2P20248 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCNA2P20248 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.21□□□□□ -0.14
CCNA2P20248 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CCNA2P20248 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.21□□□□□ -0.14
CCNA2P20248 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CCNA2P20248 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCNA2P20248 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCNA2P20248 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
CCNA2P20248 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 Z82170.1-201ENST00000625081 3192 ntBASIC14.2□□□□□ -0.14
CCNA2P20248 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCNA2P20248 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.2□□□□□ -0.14
CCNA2P20248 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CCNA2P20248 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.2□□□□□ -0.14
CCNA2P20248 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.2□□□□□ -0.14
CCNA2P20248 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCNA2P20248 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.2□□□□□ -0.14
CCNA2P20248 TSSK5P-201ENST00000423978 907 ntBASIC14.2□□□□□ -0.14
CCNA2P20248 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.2□□□□□ -0.14
CCNA2P20248 BASP1P1-201ENST00000430708 665 ntBASIC14.2□□□□□ -0.14
CCNA2P20248 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.2□□□□□ -0.14
CCNA2P20248 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.2□□□□□ -0.14
CCNA2P20248 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms