Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.44■□□□□ 0.22
EPB41P11171 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
EPB41P11171 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 AP006294.1-201ENST00000415407 339 ntBASIC16.44■□□□□ 0.22
EPB41P11171 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.44■□□□□ 0.22
EPB41P11171 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.44■□□□□ 0.22
EPB41P11171 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.44■□□□□ 0.22
EPB41P11171 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.44■□□□□ 0.22
EPB41P11171 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
EPB41P11171 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
EPB41P11171 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
EPB41P11171 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
EPB41P11171 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.44■□□□□ 0.22
EPB41P11171 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.44■□□□□ 0.22
EPB41P11171 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EPB41P11171 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EPB41P11171 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
EPB41P11171 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EPB41P11171 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
EPB41P11171 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EPB41P11171 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EPB41P11171 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.43■□□□□ 0.22
EPB41P11171 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
EPB41P11171 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
EPB41P11171 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.43■□□□□ 0.22
EPB41P11171 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
EPB41P11171 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
EPB41P11171 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EPB41P11171 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.43■□□□□ 0.22
EPB41P11171 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
EPB41P11171 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.43■□□□□ 0.22
EPB41P11171 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
EPB41P11171 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
EPB41P11171 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.43■□□□□ 0.22
EPB41P11171 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
EPB41P11171 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
EPB41P11171 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.43■□□□□ 0.22
EPB41P11171 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EPB41P11171 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.43■□□□□ 0.22
EPB41P11171 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
EPB41P11171 AC006504.5-208ENST00000588784 2401 ntBASIC16.43■□□□□ 0.22
EPB41P11171 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
EPB41P11171 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
EPB41P11171 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
EPB41P11171 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
EPB41P11171 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
EPB41P11171 PTP4A1P2-201ENST00000546033 454 ntBASIC16.42■□□□□ 0.22
EPB41P11171 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.42■□□□□ 0.22
EPB41P11171 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
EPB41P11171 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
EPB41P11171 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.42■□□□□ 0.22
EPB41P11171 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
EPB41P11171 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
EPB41P11171 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EPB41P11171 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.41■□□□□ 0.22
EPB41P11171 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.41■□□□□ 0.22
EPB41P11171 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.41■□□□□ 0.22
EPB41P11171 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
EPB41P11171 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms