Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 C18orf15-201ENST00000623680 2534 ntBASIC15.07■□□□□ 0
RETP07949 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
RETP07949 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.07■□□□□ 0
RETP07949 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.07■□□□□ 0
RETP07949 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RETP07949 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 POM121L8P-201ENST00000417732 1281 ntBASIC15.07■□□□□ 0
RETP07949 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.07■□□□□ 0
RETP07949 POM121L9P-203ENST00000441984 1285 ntBASIC15.07■□□□□ 0
RETP07949 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.07■□□□□ 0
RETP07949 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
RETP07949 AC103988.2-201ENST00000561804 725 ntBASIC15.07■□□□□ 0
RETP07949 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.07■□□□□ 0
RETP07949 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.07■□□□□ 0
RETP07949 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.07■□□□□ 0
RETP07949 AP001065.2-201ENST00000617205 644 ntBASIC15.07■□□□□ 0
RETP07949 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
RETP07949 AC009084.3-201ENST00000623356 437 ntBASIC15.07■□□□□ 0
RETP07949 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.07■□□□□ 0
RETP07949 AL805961.1-201ENST00000642026 753 ntBASIC15.07■□□□□ 0
RETP07949 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.07■□□□□ 0
RETP07949 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RETP07949 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.07■□□□□ 0
RETP07949 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RETP07949 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 KRT8P14-201ENST00000414254 1442 ntBASIC15.07■□□□□ 0
RETP07949 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RETP07949 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 AC092127.1-201ENST00000567093 3455 ntBASIC15.07■□□□□ 0
RETP07949 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RETP07949 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.06■□□□□ 0
RETP07949 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.06■□□□□ 0
RETP07949 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.06■□□□□ 0
RETP07949 AC007292.2-201ENST00000593524 1812 ntBASIC15.06■□□□□ 0
RETP07949 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.06■□□□□ 0
RETP07949 PUDPP3-201ENST00000445368 636 ntBASIC15.06■□□□□ 0
RETP07949 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.06■□□□□ 0
RETP07949 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.06■□□□□ 0
RETP07949 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.06■□□□□ 0
RETP07949 AC116345.2-201ENST00000512837 523 ntBASIC15.06■□□□□ 0
RETP07949 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.06■□□□□ 0
RETP07949 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.06■□□□□ 0
RETP07949 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RETP07949 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RETP07949 AC132192.2-201ENST00000596206 1147 ntBASIC15.06■□□□□ 0
RETP07949 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.06■□□□□ 0
RETP07949 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.06■□□□□ 0
RETP07949 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.06■□□□□ 0
RETP07949 AC068587.8-201ENST00000641239 219 ntBASIC15.06■□□□□ 0
RETP07949 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.06■□□□□ 0
RETP07949 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.06■□□□□ 0
RETP07949 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.06■□□□□ 0
RETP07949 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RETP07949 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RETP07949 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.06■□□□□ 0
RETP07949 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.06■□□□□ 0
RETP07949 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 AL009178.2-201ENST00000597278 2719 ntBASIC15.06■□□□□ 0
RETP07949 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RETP07949 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.06■□□□□ 0
RETP07949 AC063926.3-201ENST00000624734 5658 ntBASIC15.06■□□□□ 0
RETP07949 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.06■□□□□ 0
RETP07949 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RETP07949 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RETP07949 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
RETP07949 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms