Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RB1P06400 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.63■□□□□ 0.09
RB1P06400 TMBIM7P-202ENST00000641474 1516 ntBASIC15.63■□□□□ 0.09
RB1P06400 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.63■□□□□ 0.09
RB1P06400 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.63■□□□□ 0.09
RB1P06400 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RB1P06400 MARK2P16-201ENST00000605714 1723 ntBASIC15.63■□□□□ 0.09
RB1P06400 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
RB1P06400 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RB1P06400 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RB1P06400 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 LINC01815-202ENST00000641468 1409 ntBASIC15.63■□□□□ 0.09
RB1P06400 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 HLA-DMA-203ENST00000395305 777 ntBASIC15.63■□□□□ 0.09
RB1P06400 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.63■□□□□ 0.09
RB1P06400 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.63■□□□□ 0.09
RB1P06400 AL354861.1-201ENST00000445213 355 ntBASIC15.63■□□□□ 0.09
RB1P06400 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 DUX4L50-201ENST00000455245 715 ntBASIC15.63■□□□□ 0.09
RB1P06400 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.63■□□□□ 0.09
RB1P06400 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RB1P06400 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.63■□□□□ 0.09
RB1P06400 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.63■□□□□ 0.09
RB1P06400 ALG1L13P-202ENST00000519320 584 ntBASIC15.63■□□□□ 0.09
RB1P06400 AC003686.1-201ENST00000550956 1034 ntBASIC15.63■□□□□ 0.09
RB1P06400 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.63■□□□□ 0.09
RB1P06400 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RB1P06400 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 AC084781.1-201ENST00000613737 656 ntBASIC15.63■□□□□ 0.09
RB1P06400 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RB1P06400 AC005618.3-201ENST00000624928 458 ntBASIC15.63■□□□□ 0.09
RB1P06400 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.63■□□□□ 0.09
RB1P06400 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RB1P06400 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 AC007292.2-201ENST00000593524 1812 ntBASIC15.63■□□□□ 0.09
RB1P06400 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RB1P06400 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.63■□□□□ 0.09
RB1P06400 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.63■□□□□ 0.09
RB1P06400 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.63■□□□□ 0.09
RB1P06400 AL365203.3-201ENST00000609742 2057 ntBASIC15.63■□□□□ 0.09
RB1P06400 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RB1P06400 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RB1P06400 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.62■□□□□ 0.09
RB1P06400 AC090502.4-201ENST00000551714 1386 ntBASIC15.62■□□□□ 0.09
RB1P06400 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RB1P06400 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.62■□□□□ 0.09
RB1P06400 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.62■□□□□ 0.09
RB1P06400 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RB1P06400 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.62■□□□□ 0.09
RB1P06400 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.62■□□□□ 0.09
RB1P06400 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.62■□□□□ 0.09
RB1P06400 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.62■□□□□ 0.09
RB1P06400 RN7SL530P-201ENST00000485097 298 ntBASIC15.62■□□□□ 0.09
RB1P06400 MRPL22P1-201ENST00000505398 616 ntBASIC15.62■□□□□ 0.09
RB1P06400 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 AP000911.2-201ENST00000534330 502 ntBASIC15.62■□□□□ 0.09
RB1P06400 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.62■□□□□ 0.09
RB1P06400 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.62■□□□□ 0.09
RB1P06400 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RB1P06400 AC073911.3-201ENST00000624401 631 ntBASIC15.62■□□□□ 0.09
RB1P06400 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms