Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.18□□□□□ -0.14
MT-ND1P03886 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
MT-ND1P03886 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
MT-ND1P03886 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.18□□□□□ -0.14
MT-ND1P03886 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
MT-ND1P03886 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
MT-ND1P03886 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 AL080243.2-201ENST00000418783 582 ntBASIC14.18□□□□□ -0.14
MT-ND1P03886 CNN2P11-201ENST00000429351 262 ntBASIC14.18□□□□□ -0.14
MT-ND1P03886 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.18□□□□□ -0.14
MT-ND1P03886 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.18□□□□□ -0.14
MT-ND1P03886 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
MT-ND1P03886 AP006288.1-201ENST00000446065 395 ntBASIC14.18□□□□□ -0.14
MT-ND1P03886 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.18□□□□□ -0.14
MT-ND1P03886 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.18□□□□□ -0.14
MT-ND1P03886 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.18□□□□□ -0.14
MT-ND1P03886 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.18□□□□□ -0.14
MT-ND1P03886 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
MT-ND1P03886 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
MT-ND1P03886 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.18□□□□□ -0.14
MT-ND1P03886 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 Z97205.2-201ENST00000564697 1639 ntBASIC14.18□□□□□ -0.14
MT-ND1P03886 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.18□□□□□ -0.14
MT-ND1P03886 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
MT-ND1P03886 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
MT-ND1P03886 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.18□□□□□ -0.14
MT-ND1P03886 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MT-ND1P03886 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
MT-ND1P03886 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.18□□□□□ -0.14
MT-ND1P03886 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
MT-ND1P03886 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
MT-ND1P03886 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
MT-ND1P03886 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
MT-ND1P03886 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.17□□□□□ -0.14
MT-ND1P03886 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
MT-ND1P03886 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
MT-ND1P03886 AL121723.1-201ENST00000445194 1519 ntBASIC14.17□□□□□ -0.14
MT-ND1P03886 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.17□□□□□ -0.14
MT-ND1P03886 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.17□□□□□ -0.14
MT-ND1P03886 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
MT-ND1P03886 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
MT-ND1P03886 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.17□□□□□ -0.14
MT-ND1P03886 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.17□□□□□ -0.14
MT-ND1P03886 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.17□□□□□ -0.14
MT-ND1P03886 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.17□□□□□ -0.14
MT-ND1P03886 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
MT-ND1P03886 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.17□□□□□ -0.14
MT-ND1P03886 AC069262.1-201ENST00000539058 672 ntBASIC14.17□□□□□ -0.14
MT-ND1P03886 AC092865.5-201ENST00000545435 363 ntBASIC14.17□□□□□ -0.14
MT-ND1P03886 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
MT-ND1P03886 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.17□□□□□ -0.14
MT-ND1P03886 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.17□□□□□ -0.14
MT-ND1P03886 AL033527.5-202ENST00000641632 1098 ntBASIC14.17□□□□□ -0.14
MT-ND1P03886 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.17□□□□□ -0.14
MT-ND1P03886 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.17□□□□□ -0.14
MT-ND1P03886 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms