Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC3P02656 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC3P02656 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
APOC3P02656 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
APOC3P02656 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC3P02656 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC3P02656 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
APOC3P02656 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC3P02656 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC3P02656 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC3P02656 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC3P02656 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC11.98□□□□□ -0.49
APOC3P02656 SPDYE21P-201ENST00000413323 827 ntBASIC11.98□□□□□ -0.49
APOC3P02656 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.98□□□□□ -0.49
APOC3P02656 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC3P02656 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC11.98□□□□□ -0.49
APOC3P02656 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC11.98□□□□□ -0.49
APOC3P02656 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.98□□□□□ -0.49
APOC3P02656 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC3P02656 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.98□□□□□ -0.49
APOC3P02656 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC11.98□□□□□ -0.49
APOC3P02656 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
APOC3P02656 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC11.98□□□□□ -0.49
APOC3P02656 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC11.98□□□□□ -0.49
APOC3P02656 AC087623.3-201ENST00000607047 1098 ntBASIC11.98□□□□□ -0.49
APOC3P02656 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.98□□□□□ -0.49
APOC3P02656 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC3P02656 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC3P02656 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC3P02656 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
APOC3P02656 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC3P02656 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.98□□□□□ -0.49
APOC3P02656 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC3P02656 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.98□□□□□ -0.49
APOC3P02656 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC3P02656 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC3P02656 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC3P02656 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC3P02656 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC3P02656 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
APOC3P02656 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
APOC3P02656 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.97□□□□□ -0.49
APOC3P02656 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC3P02656 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC11.97□□□□□ -0.49
APOC3P02656 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 AC090114.2-201ENST00000608477 7054 ntBASIC11.97□□□□□ -0.49
APOC3P02656 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC11.97□□□□□ -0.49
APOC3P02656 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
APOC3P02656 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
APOC3P02656 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 ZNRF2P3-201ENST00000424200 374 ntBASIC11.97□□□□□ -0.49
APOC3P02656 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.97□□□□□ -0.49
APOC3P02656 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC11.97□□□□□ -0.49
APOC3P02656 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC11.97□□□□□ -0.49
APOC3P02656 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.97□□□□□ -0.49
APOC3P02656 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC11.97□□□□□ -0.49
APOC3P02656 AL390719.2-201ENST00000606993 987 ntBASIC11.97□□□□□ -0.49
APOC3P02656 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 AC092139.4-201ENST00000624318 2794 ntBASIC11.97□□□□□ -0.49
APOC3P02656 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
APOC3P02656 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
APOC3P02656 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
APOC3P02656 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC3P02656 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.97□□□□□ -0.49
APOC3P02656 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC3P02656 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC3P02656 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC3P02656 AC092028.1-202ENST00000641483 3547 ntBASIC11.97□□□□□ -0.49
APOC3P02656 AC092028.1-201ENST00000641781 3540 ntBASIC11.97□□□□□ -0.49
APOC3P02656 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOC3P02656 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC11.96□□□□□ -0.49
APOC3P02656 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC11.96□□□□□ -0.49
APOC3P02656 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC11.96□□□□□ -0.49
APOC3P02656 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOC3P02656 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.96□□□□□ -0.49
APOC3P02656 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms