Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APOC1P02654 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.33□□□□□ -0.28
APOC1P02654 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.33□□□□□ -0.28
APOC1P02654 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
APOC1P02654 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC1P02654 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
APOC1P02654 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.32□□□□□ -0.28
APOC1P02654 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
APOC1P02654 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APOC1P02654 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APOC1P02654 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
APOC1P02654 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
APOC1P02654 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
APOC1P02654 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.32□□□□□ -0.28
APOC1P02654 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APOC1P02654 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.32□□□□□ -0.28
APOC1P02654 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.32□□□□□ -0.28
APOC1P02654 AC104596.2-201ENST00000512793 793 ntBASIC13.32□□□□□ -0.28
APOC1P02654 TPRX2P-201ENST00000535362 881 ntBASIC13.32□□□□□ -0.28
APOC1P02654 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.32□□□□□ -0.28
APOC1P02654 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.32□□□□□ -0.28
APOC1P02654 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
APOC1P02654 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.32□□□□□ -0.28
APOC1P02654 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.32□□□□□ -0.28
APOC1P02654 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APOC1P02654 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APOC1P02654 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
APOC1P02654 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.32□□□□□ -0.28
APOC1P02654 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.32□□□□□ -0.28
APOC1P02654 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOC1P02654 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC1P02654 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC1P02654 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
APOC1P02654 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 DRD5P1-201ENST00000456605 1438 ntBASIC13.31□□□□□ -0.28
APOC1P02654 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC1P02654 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
APOC1P02654 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
APOC1P02654 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC1P02654 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.31□□□□□ -0.28
APOC1P02654 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC1P02654 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC1P02654 RN7SL399P-201ENST00000471648 279 ntBASIC13.31□□□□□ -0.28
APOC1P02654 AC026410.3-201ENST00000514280 936 ntBASIC13.31□□□□□ -0.28
APOC1P02654 RNA5SP421-201ENST00000516864 134 ntBASIC13.31□□□□□ -0.28
APOC1P02654 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
APOC1P02654 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.31□□□□□ -0.28
APOC1P02654 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.31□□□□□ -0.28
APOC1P02654 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.31□□□□□ -0.28
APOC1P02654 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
APOC1P02654 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC1P02654 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC1P02654 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
APOC1P02654 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms