Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFP01375 SPTLC1P5-201ENST00000450718 252 ntBASIC14.53□□□□□ -0.08
TNFP01375 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.53□□□□□ -0.08
TNFP01375 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TNFP01375 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TNFP01375 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.53□□□□□ -0.08
TNFP01375 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TNFP01375 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.53□□□□□ -0.08
TNFP01375 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.53□□□□□ -0.08
TNFP01375 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFP01375 AC026740.1-201ENST00000607068 791 ntBASIC14.53□□□□□ -0.08
TNFP01375 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.53□□□□□ -0.08
TNFP01375 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFP01375 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFP01375 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFP01375 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
TNFP01375 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFP01375 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFP01375 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFP01375 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFP01375 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFP01375 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFP01375 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TNFP01375 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TNFP01375 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFP01375 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.52□□□□□ -0.08
TNFP01375 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TNFP01375 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.52□□□□□ -0.08
TNFP01375 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
TNFP01375 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.52□□□□□ -0.08
TNFP01375 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.52□□□□□ -0.08
TNFP01375 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.52□□□□□ -0.08
TNFP01375 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TNFP01375 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFP01375 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TNFP01375 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFP01375 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFP01375 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TNFP01375 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.52□□□□□ -0.09
TNFP01375 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TNFP01375 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.52□□□□□ -0.09
TNFP01375 AL133466.1-201ENST00000447582 150 ntBASIC14.52□□□□□ -0.09
TNFP01375 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFP01375 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFP01375 RN7SL11P-201ENST00000471305 293 ntBASIC14.52□□□□□ -0.09
TNFP01375 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFP01375 MARK2P5-201ENST00000507649 634 ntBASIC14.52□□□□□ -0.09
TNFP01375 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFP01375 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.52□□□□□ -0.09
TNFP01375 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TNFP01375 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TNFP01375 RN7SL774P-201ENST00000577467 290 ntBASIC14.52□□□□□ -0.09
TNFP01375 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.52□□□□□ -0.09
TNFP01375 AL645939.5-201ENST00000606834 243 ntBASIC14.52□□□□□ -0.09
TNFP01375 MIR6720-201ENST00000611664 98 ntBASIC14.52□□□□□ -0.09
TNFP01375 AL021578.1-201ENST00000613646 709 ntBASIC14.52□□□□□ -0.09
TNFP01375 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFP01375 AL805961.1-203ENST00000641078 1258 ntBASIC14.52□□□□□ -0.09
TNFP01375 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFP01375 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFP01375 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFP01375 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFP01375 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFP01375 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFP01375 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TNFP01375 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFP01375 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TNFP01375 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFP01375 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TNFP01375 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFP01375 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFP01375 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.09
TNFP01375 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TNFP01375 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFP01375 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFP01375 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
TNFP01375 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFP01375 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFP01375 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFP01375 AL136172.1-201ENST00000598590 1394 ntBASIC14.51□□□□□ -0.09
TNFP01375 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFP01375 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFP01375 LINC01101-201ENST00000622953 1884 ntBASIC14.51□□□□□ -0.09
TNFP01375 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFP01375 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TNFP01375 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFP01375 MRPL37P1-201ENST00000592451 1337 ntBASIC14.51□□□□□ -0.09
TNFP01375 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFP01375 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFP01375 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFP01375 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TNFP01375 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFP01375 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFP01375 KLF2P1-201ENST00000447438 1042 ntBASIC14.51□□□□□ -0.09
TNFP01375 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFP01375 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFP01375 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.51□□□□□ -0.09
TNFP01375 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFP01375 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.51□□□□□ -0.09
TNFP01375 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms