Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AL118522.1-201ENST00000611368 560 ntBASIC16.74■□□□□ 0.27
ALDH1A1P00352 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 PYY2-201ENST00000315776 282 ntBASIC16.73■□□□□ 0.27
ALDH1A1P00352 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 STK33P1-201ENST00000423835 1218 ntBASIC16.73■□□□□ 0.27
ALDH1A1P00352 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 RN7SL767P-201ENST00000493013 295 ntBASIC16.73■□□□□ 0.27
ALDH1A1P00352 AC008026.2-201ENST00000495438 348 ntBASIC16.73■□□□□ 0.27
ALDH1A1P00352 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 AL627230.2-201ENST00000613254 655 ntBASIC16.73■□□□□ 0.27
ALDH1A1P00352 AC009145.4-201ENST00000625119 1294 ntBASIC16.73■□□□□ 0.27
ALDH1A1P00352 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 AC009090.5-201ENST00000624886 2285 ntBASIC16.73■□□□□ 0.27
ALDH1A1P00352 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.73■□□□□ 0.27
ALDH1A1P00352 REXO1L2P-201ENST00000425429 2069 ntBASIC16.73■□□□□ 0.27
ALDH1A1P00352 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ALDH1A1P00352 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 AC093826.1-201ENST00000508655 993 ntBASIC16.72■□□□□ 0.27
ALDH1A1P00352 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 GOLGA2P7-209ENST00000560408 745 ntBASIC16.72■□□□□ 0.27
ALDH1A1P00352 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 AL591471.1-201ENST00000621855 229 ntBASIC16.72■□□□□ 0.27
ALDH1A1P00352 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALDH1A1P00352 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.72■□□□□ 0.27
ALDH1A1P00352 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALDH1A1P00352 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
ALDH1A1P00352 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALDH1A1P00352 AC022211.2-201ENST00000585075 2527 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms