Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 AC103988.2-201ENST00000561804 725 ntBASIC15.09■□□□□ 0.01
PRAMEF11O60813 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 RN7SL560P-201ENST00000577943 264 ntBASIC15.09■□□□□ 0.01
PRAMEF11O60813 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 AC244157.2-201ENST00000616239 1006 ntBASIC15.09■□□□□ 0.01
PRAMEF11O60813 MIR6752-201ENST00000618442 71 ntBASIC15.09■□□□□ 0.01
PRAMEF11O60813 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 LINC00552-201ENST00000625151 2579 ntBASIC15.09■□□□□ 0.01
PRAMEF11O60813 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.09■□□□□ 0.01
PRAMEF11O60813 SHC1P1-201ENST00000425230 1745 ntBASIC15.09■□□□□ 0.01
PRAMEF11O60813 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRAMEF11O60813 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
PRAMEF11O60813 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRAMEF11O60813 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRAMEF11O60813 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRAMEF11O60813 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.08■□□□□ 0.01
PRAMEF11O60813 AC015818.8-201ENST00000587907 1519 ntBASIC15.08■□□□□ 0.01
PRAMEF11O60813 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.08■□□□□ 0.01
PRAMEF11O60813 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PRAMEF11O60813 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.08■□□□□ 0.01
PRAMEF11O60813 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF11O60813 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF11O60813 AL590440.2-201ENST00000641973 1595 ntBASIC15.08■□□□□ 0
PRAMEF11O60813 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF11O60813 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF11O60813 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF11O60813 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF11O60813 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF11O60813 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF11O60813 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF11O60813 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.08■□□□□ 0
PRAMEF11O60813 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.08■□□□□ 0
PRAMEF11O60813 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF11O60813 RPL13AP20-201ENST00000459725 609 ntBASIC15.08■□□□□ 0
PRAMEF11O60813 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.08■□□□□ 0
PRAMEF11O60813 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.08■□□□□ 0
PRAMEF11O60813 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
PRAMEF11O60813 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF11O60813 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.08■□□□□ 0
PRAMEF11O60813 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.08■□□□□ 0
PRAMEF11O60813 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.08■□□□□ 0
PRAMEF11O60813 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.08■□□□□ 0
PRAMEF11O60813 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF11O60813 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF11O60813 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PRAMEF11O60813 AGGF1P1-201ENST00000509500 2073 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms