Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.03■□□□□ -0
SMAD6O43541 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
SMAD6O43541 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.03■□□□□ -0
SMAD6O43541 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.03■□□□□ -0
SMAD6O43541 PUDPP3-201ENST00000445368 636 ntBASIC15.03■□□□□ -0
SMAD6O43541 KLF2P1-201ENST00000447438 1042 ntBASIC15.03■□□□□ -0
SMAD6O43541 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 RNMTL1P1-201ENST00000454103 560 ntBASIC15.03■□□□□ -0
SMAD6O43541 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.03■□□□□ -0
SMAD6O43541 AP001258.2-201ENST00000529891 490 ntBASIC15.03■□□□□ -0
SMAD6O43541 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.03■□□□□ -0
SMAD6O43541 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.03■□□□□ -0
SMAD6O43541 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SMAD6O43541 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.03■□□□□ -0
SMAD6O43541 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 AC008825.2-201ENST00000603374 718 ntBASIC15.03■□□□□ -0
SMAD6O43541 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SMAD6O43541 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SMAD6O43541 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.03■□□□□ -0
SMAD6O43541 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SMAD6O43541 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.03■□□□□ -0
SMAD6O43541 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.03■□□□□ -0
SMAD6O43541 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
SMAD6O43541 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMAD6O43541 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SMAD6O43541 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SMAD6O43541 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.02■□□□□ -0
SMAD6O43541 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMAD6O43541 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMAD6O43541 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMAD6O43541 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMAD6O43541 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.02■□□□□ -0
SMAD6O43541 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMAD6O43541 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SMAD6O43541 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMAD6O43541 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SMAD6O43541 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMAD6O43541 MRPL37P1-201ENST00000592451 1337 ntBASIC15.02■□□□□ -0
SMAD6O43541 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMAD6O43541 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMAD6O43541 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.02■□□□□ -0
SMAD6O43541 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMAD6O43541 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.02■□□□□ -0
SMAD6O43541 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMAD6O43541 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.02■□□□□ -0
SMAD6O43541 AC004898.1-201ENST00000451057 766 ntBASIC15.02■□□□□ -0
SMAD6O43541 CICP12-201ENST00000455801 843 ntBASIC15.02■□□□□ -0
SMAD6O43541 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.02■□□□□ -0
SMAD6O43541 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.02■□□□□ -0
SMAD6O43541 AC021723.1-201ENST00000486306 515 ntBASIC15.02■□□□□ -0
SMAD6O43541 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.02■□□□□ -0
SMAD6O43541 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.02■□□□□ -0
SMAD6O43541 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.02■□□□□ -0
SMAD6O43541 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.02■□□□□ -0
SMAD6O43541 AC100827.2-201ENST00000563214 1194 ntBASIC15.02■□□□□ -0
SMAD6O43541 AC132192.2-201ENST00000596206 1147 ntBASIC15.02■□□□□ -0
SMAD6O43541 AC022748.3-201ENST00000621828 275 ntBASIC15.02■□□□□ -0
SMAD6O43541 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.02□□□□□ -0.01
SMAD6O43541 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMAD6O43541 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
SMAD6O43541 AC244394.1-201ENST00000435000 1665 ntBASIC15.02□□□□□ -0.01
SMAD6O43541 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.02□□□□□ -0.01
SMAD6O43541 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SMAD6O43541 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMAD6O43541 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.02□□□□□ -0.01
SMAD6O43541 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.02□□□□□ -0.01
SMAD6O43541 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMAD6O43541 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SMAD6O43541 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.01□□□□□ -0.01
SMAD6O43541 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMAD6O43541 AC092135.3-201ENST00000624151 1846 ntBASIC15.01□□□□□ -0.01
SMAD6O43541 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
SMAD6O43541 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.01□□□□□ -0.01
SMAD6O43541 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMAD6O43541 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMAD6O43541 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMAD6O43541 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SMAD6O43541 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMAD6O43541 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.01□□□□□ -0.01
SMAD6O43541 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMAD6O43541 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMAD6O43541 NKAIN1P1-201ENST00000435754 582 ntBASIC15.01□□□□□ -0.01
SMAD6O43541 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMAD6O43541 AC126915.1-201ENST00000522847 1038 ntBASIC15.01□□□□□ -0.01
SMAD6O43541 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMAD6O43541 AL451050.2-201ENST00000606967 682 ntBASIC15.01□□□□□ -0.01
SMAD6O43541 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.01□□□□□ -0.01
SMAD6O43541 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMAD6O43541 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms