Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RIPK2O43353 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
RIPK2O43353 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RIPK2O43353 AC073548.1-201ENST00000624088 1882 ntBASIC15.2■□□□□ 0.02
RIPK2O43353 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RIPK2O43353 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.2■□□□□ 0.02
RIPK2O43353 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RIPK2O43353 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RIPK2O43353 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.2■□□□□ 0.02
RIPK2O43353 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.2■□□□□ 0.02
RIPK2O43353 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.2■□□□□ 0.02
RIPK2O43353 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 AL512356.2-201ENST00000546955 174 ntBASIC15.2■□□□□ 0.02
RIPK2O43353 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.2■□□□□ 0.02
RIPK2O43353 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.2■□□□□ 0.02
RIPK2O43353 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.2■□□□□ 0.02
RIPK2O43353 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 AC092364.2-202ENST00000597012 1073 ntBASIC15.2■□□□□ 0.02
RIPK2O43353 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.2■□□□□ 0.02
RIPK2O43353 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
RIPK2O43353 AL138828.2-201ENST00000615812 383 ntBASIC15.2■□□□□ 0.02
RIPK2O43353 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 AL158212.4-201ENST00000624062 1286 ntBASIC15.2■□□□□ 0.02
RIPK2O43353 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RIPK2O43353 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.2■□□□□ 0.02
RIPK2O43353 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.2■□□□□ 0.02
RIPK2O43353 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.2■□□□□ 0.02
RIPK2O43353 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.2■□□□□ 0.02
RIPK2O43353 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RIPK2O43353 AC215219.1-201ENST00000400706 1817 ntBASIC15.2■□□□□ 0.02
RIPK2O43353 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.2■□□□□ 0.02
RIPK2O43353 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
RIPK2O43353 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 AC090643.2-201ENST00000623442 2029 ntBASIC15.19■□□□□ 0.02
RIPK2O43353 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RIPK2O43353 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.19■□□□□ 0.02
RIPK2O43353 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
RIPK2O43353 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.19■□□□□ 0.02
RIPK2O43353 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.19■□□□□ 0.02
RIPK2O43353 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RIPK2O43353 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.19■□□□□ 0.02
RIPK2O43353 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.19■□□□□ 0.02
RIPK2O43353 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RIPK2O43353 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
RIPK2O43353 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
RIPK2O43353 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RIPK2O43353 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RIPK2O43353 CLK3P2-201ENST00000427566 1453 ntBASIC15.19■□□□□ 0.02
RIPK2O43353 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RIPK2O43353 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
RIPK2O43353 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RIPK2O43353 AC011498.7-201ENST00000624986 2027 ntBASIC15.19■□□□□ 0.02
RIPK2O43353 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms