Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
E2F3O00716 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
E2F3O00716 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.61□□□□□ -0.07
E2F3O00716 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
E2F3O00716 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.61□□□□□ -0.07
E2F3O00716 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.61□□□□□ -0.07
E2F3O00716 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.61□□□□□ -0.07
E2F3O00716 AC119751.2-201ENST00000504529 210 ntBASIC14.61□□□□□ -0.07
E2F3O00716 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.61□□□□□ -0.07
E2F3O00716 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.61□□□□□ -0.07
E2F3O00716 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 AC133539.2-201ENST00000604757 467 ntBASIC14.61□□□□□ -0.07
E2F3O00716 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.61□□□□□ -0.07
E2F3O00716 AP005019.2-201ENST00000615104 511 ntBASIC14.61□□□□□ -0.07
E2F3O00716 AC005252.2-201ENST00000624630 1141 ntBASIC14.61□□□□□ -0.07
E2F3O00716 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.61□□□□□ -0.07
E2F3O00716 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.61□□□□□ -0.07
E2F3O00716 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
E2F3O00716 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
E2F3O00716 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.6□□□□□ -0.07
E2F3O00716 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
E2F3O00716 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.6□□□□□ -0.07
E2F3O00716 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
E2F3O00716 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
E2F3O00716 AC136759.1-202ENST00000530858 2194 ntBASIC14.6□□□□□ -0.07
E2F3O00716 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
E2F3O00716 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
E2F3O00716 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 ACTBP8-201ENST00000403258 1108 ntBASIC14.6□□□□□ -0.07
E2F3O00716 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.6□□□□□ -0.07
E2F3O00716 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.6□□□□□ -0.07
E2F3O00716 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
E2F3O00716 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.6□□□□□ -0.07
E2F3O00716 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.6□□□□□ -0.07
E2F3O00716 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.6□□□□□ -0.07
E2F3O00716 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
E2F3O00716 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
E2F3O00716 AL512343.1-201ENST00000605837 169 ntBASIC14.6□□□□□ -0.07
E2F3O00716 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.6□□□□□ -0.07
E2F3O00716 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.6□□□□□ -0.07
E2F3O00716 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
E2F3O00716 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.6□□□□□ -0.07
E2F3O00716 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
E2F3O00716 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
E2F3O00716 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.6□□□□□ -0.07
E2F3O00716 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.6□□□□□ -0.07
E2F3O00716 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
E2F3O00716 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms