Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 CETN4P-206ENST00000642099 2168 ntBASIC12.84□□□□□ -0.35
TMEM235A6NFC5 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 ELL2P1-201ENST00000413990 1906 ntBASIC12.84□□□□□ -0.35
TMEM235A6NFC5 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM235A6NFC5 AL731571.1-201ENST00000617058 5428 ntBASIC12.83□□□□□ -0.35
TMEM235A6NFC5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
TMEM235A6NFC5 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.83□□□□□ -0.35
TMEM235A6NFC5 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TMEM235A6NFC5 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TMEM235A6NFC5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TMEM235A6NFC5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.83□□□□□ -0.35
TMEM235A6NFC5 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 AL137783.1-201ENST00000623494 1896 ntBASIC12.83□□□□□ -0.36
TMEM235A6NFC5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 CEND1P1-201ENST00000451006 455 ntBASIC12.83□□□□□ -0.36
TMEM235A6NFC5 AC004066.1-201ENST00000502488 802 ntBASIC12.83□□□□□ -0.36
TMEM235A6NFC5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 AC074044.1-201ENST00000609673 707 ntBASIC12.83□□□□□ -0.36
TMEM235A6NFC5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 AC090505.1-201ENST00000430515 1834 ntBASIC12.83□□□□□ -0.36
TMEM235A6NFC5 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM235A6NFC5 INE2-201ENST00000630399 1874 ntBASIC12.82□□□□□ -0.36
TMEM235A6NFC5 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.82□□□□□ -0.36
TMEM235A6NFC5 AC004832.2-201ENST00000426397 482 ntBASIC12.82□□□□□ -0.36
TMEM235A6NFC5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms