Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 C8orf49-201ENST00000525043 1968 ntBASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC093433.1-201ENST00000458048 571 ntBASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC026410.3-201ENST00000514280 936 ntBASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AP001889.1-201ENST00000525414 633 ntBASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SNX29P1-201ENST00000548357 1007 ntBASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RPSAP52-203ENST00000622976 1023 ntBASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AL645728.2-202ENST00000641679 227 ntBASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.08□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.08□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.08□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 C2orf27AP3-201ENST00000434123 579 ntBASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC007551.1-201ENST00000457394 519 ntBASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms