Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 AL662844.1-201ENST00000546340 181 ntBASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 RN7SL510P-201ENST00000581311 263 ntBASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 LINC01115-203ENST00000606068 577 ntBASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 AC083964.2-201ENST00000623988 2396 ntBASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRDV1A0A1B0GX56 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 MTND6P24-201ENST00000440466 518 ntBASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 ACTG1P14-201ENST00000446382 1122 ntBASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 SERBP1P3-201ENST00000459980 809 ntBASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 AL033527.5-202ENST00000641632 1098 ntBASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms