Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.66■□□□□ 0.58
LOC102724428A0A0B4J2F2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LOC102724428A0A0B4J2F2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LOC102724428A0A0B4J2F2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LOC102724428A0A0B4J2F2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LOC102724428A0A0B4J2F2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.66■□□□□ 0.58
LOC102724428A0A0B4J2F2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.66■□□□□ 0.58
LOC102724428A0A0B4J2F2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LOC102724428A0A0B4J2F2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LOC102724428A0A0B4J2F2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LOC102724428A0A0B4J2F2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
LOC102724428A0A0B4J2F2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LOC102724428A0A0B4J2F2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LOC102724428A0A0B4J2F2 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 RPL18AP8-201ENST00000486071 528 ntBASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 AREG-202ENST00000502307 956 ntTSL 5 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.65■□□□□ 0.58
LOC102724428A0A0B4J2F2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.58
LOC102724428A0A0B4J2F2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
LOC102724428A0A0B4J2F2 AC006504.5-208ENST00000588784 2401 ntBASIC18.64■□□□□ 0.58
LOC102724428A0A0B4J2F2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LOC102724428A0A0B4J2F2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.64■□□□□ 0.58
LOC102724428A0A0B4J2F2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 PSMD4P1-201ENST00000433951 1109 ntBASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC024293.1-201ENST00000467930 498 ntBASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 RPS23-204ENST00000507980 836 ntTSL 2 BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 MIR2392-201ENST00000584881 84 ntBASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC136621.1-201ENST00000624017 2304 ntBASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 CICP23-201ENST00000605013 2741 ntBASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LOC102724428A0A0B4J2F2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 MIR645-201ENST00000385283 94 ntBASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 STK16-203ENST00000409516 895 ntTSL 2 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 RN7SKP109-201ENST00000410592 316 ntBASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 ERP29P1-201ENST00000442902 706 ntBASIC18.63■□□□□ 0.57
LOC102724428A0A0B4J2F2 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms