Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 AC004987.2-201ENST00000395959 1148 ntBASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 AC040169.1-201ENST00000565382 521 ntBASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRCH1Q9Y2L9 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 REXO1L4P-201ENST00000605109 1937 ntBASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 AP001972.5-201ENST00000624624 2338 ntBASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 PHKG1P2-201ENST00000457537 863 ntBASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 AC064836.3-201ENST00000607928 673 ntBASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 KHSRPP1-201ENST00000427983 1768 ntBASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 AP000437.1-201ENST00000624057 2085 ntBASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.29□□□□□ -0.12
LRCH1Q9Y2L9 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms