Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 AC145423.3-201ENST00000615987 467 ntBASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 AL162274.1-201ENST00000617191 1098 ntBASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 AC005912.2-201ENST00000619492 2400 ntBASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 FGD5P1-202ENST00000614866 2498 ntBASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 AC018665.1-201ENST00000622927 1362 ntBASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 GNRHR2-203ENST00000581100 1187 ntBASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 AC067750.1-201ENST00000608826 6545 ntBASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.65■□□□□ 0.1
PPARGC1AQ9UBK2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
PPARGC1AQ9UBK2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 AL138709.1-201ENST00000614840 1693 ntBASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 KRT43P-201ENST00000434019 910 ntBASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 U91328.1-201ENST00000437528 223 ntBASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 BCRP2-202ENST00000447763 634 ntBASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 BCRP6-201ENST00000510112 632 ntBASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 BCRP7-201ENST00000511549 544 ntBASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 AL137783.1-201ENST00000623494 1896 ntBASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 AC132938.4-201ENST00000623835 848 ntBASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.64■□□□□ 0.09
PPARGC1AQ9UBK2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms