Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 LILRP1-201ENST00000444199 1370 ntBASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 AC018665.1-201ENST00000622927 1362 ntBASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 AL137784.3-201ENST00000623858 2288 ntBASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 HLA-K-203ENST00000430151 1046 ntBASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 AC239800.4-201ENST00000603712 296 ntBASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 AC145423.3-201ENST00000615987 467 ntBASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PARPBPQ9NWS1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms