Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CISHQ9NSE2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CISHQ9NSE2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CISHQ9NSE2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 AC092135.3-201ENST00000624151 1846 ntBASIC15.92■□□□□ 0.14
CISHQ9NSE2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CISHQ9NSE2 AL136172.1-201ENST00000598590 1394 ntBASIC15.92■□□□□ 0.14
CISHQ9NSE2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CISHQ9NSE2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CISHQ9NSE2 OR8S1-201ENST00000310194 1080 ntBASIC15.92■□□□□ 0.14
CISHQ9NSE2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CISHQ9NSE2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CISHQ9NSE2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 IGHV3-71-201ENST00000523324 359 ntBASIC15.92■□□□□ 0.14
CISHQ9NSE2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CISHQ9NSE2 AC079316.1-201ENST00000548397 411 ntBASIC15.92■□□□□ 0.14
CISHQ9NSE2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 C2orf69P2-201ENST00000562032 1123 ntBASIC15.92■□□□□ 0.14
CISHQ9NSE2 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 AC017083.2-201ENST00000608069 979 ntBASIC15.92■□□□□ 0.14
CISHQ9NSE2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CISHQ9NSE2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CISHQ9NSE2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CISHQ9NSE2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CISHQ9NSE2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.92■□□□□ 0.14
CISHQ9NSE2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CISHQ9NSE2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 MIR4683-201ENST00000579659 81 ntBASIC15.91■□□□□ 0.14
CISHQ9NSE2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 AC008687.7-202ENST00000637404 953 ntBASIC15.91■□□□□ 0.14
CISHQ9NSE2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CISHQ9NSE2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 MRPL37P1-201ENST00000592451 1337 ntBASIC15.91■□□□□ 0.14
CISHQ9NSE2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
CISHQ9NSE2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms