Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C12orf4Q9NQ89 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 AC084364.1-201ENST00000551967 1556 ntBASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 AL591122.2-201ENST00000624125 1853 ntBASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 AC023274.1-201ENST00000418278 595 ntBASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 FAM8A3P-201ENST00000427218 844 ntBASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 AC069335.1-201ENST00000489972 472 ntBASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 AC040169.1-201ENST00000565382 521 ntBASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
C12orf4Q9NQ89 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
C12orf4Q9NQ89 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
C12orf4Q9NQ89 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
C12orf4Q9NQ89 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
C12orf4Q9NQ89 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
C12orf4Q9NQ89 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms