Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 AC112693.3-201ENST00000624819 1983 ntBASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 AC021723.1-201ENST00000486306 515 ntBASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 MESTP3-201ENST00000503460 968 ntBASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 DUX4L47-201ENST00000566374 394 ntBASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 REXO1L5P-201ENST00000622260 2098 ntBASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF3Q9HD45 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 AC007292.2-201ENST00000593524 1812 ntBASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 AC104457.1-201ENST00000401024 814 ntBASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 SPTLC1P5-201ENST00000450718 252 ntBASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
TM9SF3Q9HD45 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
TM9SF3Q9HD45 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TM9SF3Q9HD45 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TM9SF3Q9HD45 KRT8P29-201ENST00000420409 1371 ntBASIC14.96□□□□□ -0.02
TM9SF3Q9HD45 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.02
TM9SF3Q9HD45 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms