Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF304Q9HCX3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF304Q9HCX3 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 AC026434.2-201ENST00000506094 1078 ntBASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 PCDHA3-202ENST00000532566 4594 ntBASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 RN7SL560P-201ENST00000577943 264 ntBASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 AC009542.2-202ENST00000619004 1067 ntBASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF304Q9HCX3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 LILRP1-201ENST00000444199 1370 ntBASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF304Q9HCX3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 HOMER2P2-201ENST00000451621 847 ntBASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 FTLP10-202ENST00000505798 471 ntBASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 AC092658.1-201ENST00000505836 891 ntBASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 RN7SL219P-201ENST00000582872 296 ntBASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 PPT1-215ENST00000641471 2368 ntBASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF304Q9HCX3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms