Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 AL023803.2-201ENST00000620080 638 ntBASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 NUP210P1-202ENST00000504322 710 ntBASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 AL162426.1-201ENST00000624141 743 ntBASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 TUBBP5-203ENST00000508529 1334 ntBASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 AL136172.1-201ENST00000598590 1394 ntBASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
KIAA1549Q9HCM3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 AC139712.1-201ENST00000378256 1875 ntBASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 KRT8P28-201ENST00000433288 1390 ntBASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 RNA5SP423-201ENST00000517127 109 ntBASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 AC009779.1-201ENST00000551138 283 ntBASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 DUX4L46-201ENST00000566845 751 ntBASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.17□□□□□ -0.3
KIAA1549Q9HCM3 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms